Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.91■■□□□ 1.26
PGBD3Q8N328 AC087623.3-201ENST00000607047 1098 ntBASIC22.91■■□□□ 1.26
PGBD3Q8N328 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PGBD3Q8N328 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PGBD3Q8N328 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PGBD3Q8N328 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
PGBD3Q8N328 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
PGBD3Q8N328 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PGBD3Q8N328 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PGBD3Q8N328 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.9■■□□□ 1.26
PGBD3Q8N328 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.9■■□□□ 1.26
PGBD3Q8N328 AC136469.2-201ENST00000623944 1028 ntBASIC22.9■■□□□ 1.26
PGBD3Q8N328 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.9■■□□□ 1.26
PGBD3Q8N328 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PGBD3Q8N328 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PGBD3Q8N328 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.9■■□□□ 1.26
PGBD3Q8N328 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.26
PGBD3Q8N328 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PGBD3Q8N328 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PGBD3Q8N328 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PGBD3Q8N328 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PGBD3Q8N328 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.89■■□□□ 1.25
PGBD3Q8N328 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.89■■□□□ 1.25
PGBD3Q8N328 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.89■■□□□ 1.25
PGBD3Q8N328 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.89■■□□□ 1.25
PGBD3Q8N328 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PGBD3Q8N328 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PGBD3Q8N328 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PGBD3Q8N328 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.88■■□□□ 1.25
PGBD3Q8N328 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PGBD3Q8N328 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PGBD3Q8N328 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.88■■□□□ 1.25
PGBD3Q8N328 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.88■■□□□ 1.25
PGBD3Q8N328 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.88■■□□□ 1.25
PGBD3Q8N328 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.88■■□□□ 1.25
PGBD3Q8N328 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PGBD3Q8N328 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PGBD3Q8N328 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
PGBD3Q8N328 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PGBD3Q8N328 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PGBD3Q8N328 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PGBD3Q8N328 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.87■■□□□ 1.25
PGBD3Q8N328 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.87■■□□□ 1.25
PGBD3Q8N328 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.87■■□□□ 1.25
PGBD3Q8N328 MIR3181-201ENST00000578512 73 ntBASIC22.87■■□□□ 1.25
PGBD3Q8N328 AC233992.3-201ENST00000607491 485 ntBASIC22.87■■□□□ 1.25
PGBD3Q8N328 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.87■■□□□ 1.25
PGBD3Q8N328 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PGBD3Q8N328 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
PGBD3Q8N328 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PGBD3Q8N328 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.87■■□□□ 1.25
PGBD3Q8N328 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PGBD3Q8N328 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PGBD3Q8N328 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.86■■□□□ 1.25
PGBD3Q8N328 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.86■■□□□ 1.25
PGBD3Q8N328 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PGBD3Q8N328 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.85■■□□□ 1.25
PGBD3Q8N328 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PGBD3Q8N328 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.85■■□□□ 1.25
PGBD3Q8N328 AL162430.1-201ENST00000480705 870 ntBASIC22.85■■□□□ 1.25
PGBD3Q8N328 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PGBD3Q8N328 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PGBD3Q8N328 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PGBD3Q8N328 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PGBD3Q8N328 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.85■■□□□ 1.25
PGBD3Q8N328 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PGBD3Q8N328 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PGBD3Q8N328 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.84■■□□□ 1.25
PGBD3Q8N328 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.84■■□□□ 1.25
PGBD3Q8N328 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PGBD3Q8N328 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PGBD3Q8N328 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PGBD3Q8N328 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.84■■□□□ 1.25
PGBD3Q8N328 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PGBD3Q8N328 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PGBD3Q8N328 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.83■■□□□ 1.25
PGBD3Q8N328 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PGBD3Q8N328 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.83■■□□□ 1.25
PGBD3Q8N328 BX842568.3-201ENST00000418104 571 ntBASIC22.83■■□□□ 1.25
PGBD3Q8N328 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.83■■□□□ 1.25
PGBD3Q8N328 AC126544.1-201ENST00000580842 1059 ntBASIC22.83■■□□□ 1.25
PGBD3Q8N328 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
PGBD3Q8N328 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
PGBD3Q8N328 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PGBD3Q8N328 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PGBD3Q8N328 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.83■■□□□ 1.24
PGBD3Q8N328 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.83■■□□□ 1.24
PGBD3Q8N328 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PGBD3Q8N328 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PGBD3Q8N328 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PGBD3Q8N328 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PGBD3Q8N328 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PGBD3Q8N328 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PGBD3Q8N328 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PGBD3Q8N328 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PGBD3Q8N328 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.82■■□□□ 1.24
PGBD3Q8N328 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PGBD3Q8N328 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.82■■□□□ 1.24
PGBD3Q8N328 pRNA.6-201ENST00000610482 90 ntBASIC22.82■■□□□ 1.24
PGBD3Q8N328 pRNA.5-201ENST00000612139 90 ntBASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms