Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 ID1-201ENST00000376105 1233 ntBASIC23.59■■□□□ 1.37
DENND4AQ7Z401 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.59■■□□□ 1.37
DENND4AQ7Z401 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DENND4AQ7Z401 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
DENND4AQ7Z401 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
DENND4AQ7Z401 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.37
DENND4AQ7Z401 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
DENND4AQ7Z401 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.58■■□□□ 1.36
DENND4AQ7Z401 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.58■■□□□ 1.36
DENND4AQ7Z401 AL354811.1-201ENST00000610286 706 ntBASIC23.58■■□□□ 1.36
DENND4AQ7Z401 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DENND4AQ7Z401 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DENND4AQ7Z401 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.57■■□□□ 1.36
DENND4AQ7Z401 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.57■■□□□ 1.36
DENND4AQ7Z401 pRNA.6-201ENST00000610482 90 ntBASIC23.57■■□□□ 1.36
DENND4AQ7Z401 pRNA.5-201ENST00000612139 90 ntBASIC23.57■■□□□ 1.36
DENND4AQ7Z401 pRNA.11-201ENST00000618423 90 ntBASIC23.57■■□□□ 1.36
DENND4AQ7Z401 pRNA.13-201ENST00000619112 90 ntBASIC23.57■■□□□ 1.36
DENND4AQ7Z401 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
DENND4AQ7Z401 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DENND4AQ7Z401 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DENND4AQ7Z401 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.57■■□□□ 1.36
DENND4AQ7Z401 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
DENND4AQ7Z401 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DENND4AQ7Z401 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DENND4AQ7Z401 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
DENND4AQ7Z401 AC004911.1-201ENST00000416316 871 ntBASIC23.56■■□□□ 1.36
DENND4AQ7Z401 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
DENND4AQ7Z401 MIR6084-201ENST00000622012 110 ntBASIC23.56■■□□□ 1.36
DENND4AQ7Z401 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DENND4AQ7Z401 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DENND4AQ7Z401 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DENND4AQ7Z401 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DENND4AQ7Z401 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DENND4AQ7Z401 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.56■■□□□ 1.36
DENND4AQ7Z401 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.56■■□□□ 1.36
DENND4AQ7Z401 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DENND4AQ7Z401 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DENND4AQ7Z401 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DENND4AQ7Z401 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.55■■□□□ 1.36
DENND4AQ7Z401 TERF1P2-201ENST00000583350 1212 ntBASIC23.55■■□□□ 1.36
DENND4AQ7Z401 AC091060.1-201ENST00000623524 1766 ntBASIC23.55■■□□□ 1.36
DENND4AQ7Z401 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DENND4AQ7Z401 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.55■■□□□ 1.36
DENND4AQ7Z401 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DENND4AQ7Z401 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.55■■□□□ 1.36
DENND4AQ7Z401 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DENND4AQ7Z401 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.55■■□□□ 1.36
DENND4AQ7Z401 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.54■■□□□ 1.36
DENND4AQ7Z401 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
DENND4AQ7Z401 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
DENND4AQ7Z401 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
DENND4AQ7Z401 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
DENND4AQ7Z401 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.54■■□□□ 1.36
DENND4AQ7Z401 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DENND4AQ7Z401 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DENND4AQ7Z401 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DENND4AQ7Z401 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.53■■□□□ 1.36
DENND4AQ7Z401 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
DENND4AQ7Z401 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.53■■□□□ 1.36
DENND4AQ7Z401 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.53■■□□□ 1.36
DENND4AQ7Z401 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.53■■□□□ 1.36
DENND4AQ7Z401 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.52■■□□□ 1.36
DENND4AQ7Z401 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DENND4AQ7Z401 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DENND4AQ7Z401 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.52■■□□□ 1.36
DENND4AQ7Z401 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DENND4AQ7Z401 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
DENND4AQ7Z401 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.52■■□□□ 1.36
DENND4AQ7Z401 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.52■■□□□ 1.36
DENND4AQ7Z401 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DENND4AQ7Z401 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.52■■□□□ 1.36
DENND4AQ7Z401 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.52■■□□□ 1.36
DENND4AQ7Z401 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
DENND4AQ7Z401 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DENND4AQ7Z401 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.35
DENND4AQ7Z401 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 AC010525.1-201ENST00000585559 441 ntBASIC23.51■■□□□ 1.35
DENND4AQ7Z401 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
DENND4AQ7Z401 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DENND4AQ7Z401 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DENND4AQ7Z401 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DENND4AQ7Z401 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DENND4AQ7Z401 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
DENND4AQ7Z401 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
DENND4AQ7Z401 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DENND4AQ7Z401 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
DENND4AQ7Z401 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms