Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
RC3H1Q5TC82 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
RC3H1Q5TC82 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
RC3H1Q5TC82 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
RC3H1Q5TC82 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC28.93■■■□□ 2.22
RC3H1Q5TC82 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RC3H1Q5TC82 AC012414.1-201ENST00000556676 535 ntBASIC28.93■■■□□ 2.22
RC3H1Q5TC82 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC28.93■■■□□ 2.22
RC3H1Q5TC82 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RC3H1Q5TC82 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
RC3H1Q5TC82 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
RC3H1Q5TC82 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.92■■■□□ 2.22
RC3H1Q5TC82 AL354811.1-201ENST00000610286 706 ntBASIC28.92■■■□□ 2.22
RC3H1Q5TC82 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RC3H1Q5TC82 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
RC3H1Q5TC82 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
RC3H1Q5TC82 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RC3H1Q5TC82 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC28.91■■■□□ 2.22
RC3H1Q5TC82 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC28.91■■■□□ 2.22
RC3H1Q5TC82 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
RC3H1Q5TC82 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
RC3H1Q5TC82 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RC3H1Q5TC82 DUSP8P4-201ENST00000399538 1761 ntBASIC28.9■■■□□ 2.22
RC3H1Q5TC82 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.9■■■□□ 2.22
RC3H1Q5TC82 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
RC3H1Q5TC82 AC004911.1-201ENST00000416316 871 ntBASIC28.9■■■□□ 2.22
RC3H1Q5TC82 DLX3-202ENST00000512495 834 ntTSL 2 BASIC28.9■■■□□ 2.22
RC3H1Q5TC82 CCDC92B-201ENST00000575506 885 ntBASIC28.9■■■□□ 2.22
RC3H1Q5TC82 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC28.9■■■□□ 2.22
RC3H1Q5TC82 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
RC3H1Q5TC82 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
RC3H1Q5TC82 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
RC3H1Q5TC82 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
RC3H1Q5TC82 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
RC3H1Q5TC82 MIR6084-201ENST00000622012 110 ntBASIC28.89■■■□□ 2.22
RC3H1Q5TC82 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
RC3H1Q5TC82 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC28.88■■■□□ 2.21
RC3H1Q5TC82 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC28.88■■■□□ 2.21
RC3H1Q5TC82 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC28.88■■■□□ 2.21
RC3H1Q5TC82 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
RC3H1Q5TC82 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC28.88■■■□□ 2.21
RC3H1Q5TC82 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RC3H1Q5TC82 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RC3H1Q5TC82 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
RC3H1Q5TC82 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RC3H1Q5TC82 ALDH1A3-203ENST00000557963 1670 ntBASIC28.87■■■□□ 2.21
RC3H1Q5TC82 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC28.87■■■□□ 2.21
RC3H1Q5TC82 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC28.87■■■□□ 2.21
RC3H1Q5TC82 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.86■■■□□ 2.21
RC3H1Q5TC82 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
RC3H1Q5TC82 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RC3H1Q5TC82 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
RC3H1Q5TC82 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RC3H1Q5TC82 ID1-201ENST00000376105 1233 ntBASIC28.86■■■□□ 2.21
RC3H1Q5TC82 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
RC3H1Q5TC82 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
RC3H1Q5TC82 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC28.86■■■□□ 2.21
RC3H1Q5TC82 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC28.86■■■□□ 2.21
RC3H1Q5TC82 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RC3H1Q5TC82 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC28.86■■■□□ 2.21
RC3H1Q5TC82 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
RC3H1Q5TC82 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.86■■■□□ 2.21
RC3H1Q5TC82 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.85■■■□□ 2.21
RC3H1Q5TC82 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
RC3H1Q5TC82 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.85■■■□□ 2.21
RC3H1Q5TC82 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.85■■■□□ 2.21
RC3H1Q5TC82 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RC3H1Q5TC82 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC28.85■■■□□ 2.21
RC3H1Q5TC82 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
RC3H1Q5TC82 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC28.85■■■□□ 2.21
RC3H1Q5TC82 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
RC3H1Q5TC82 TERF1P2-201ENST00000583350 1212 ntBASIC28.85■■■□□ 2.21
RC3H1Q5TC82 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RC3H1Q5TC82 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RC3H1Q5TC82 VPS53-216ENST00000574029 585 ntTSL 4 BASIC28.84■■■□□ 2.21
RC3H1Q5TC82 NTF6G-201ENST00000591094 616 ntBASIC28.84■■■□□ 2.21
RC3H1Q5TC82 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RC3H1Q5TC82 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
RC3H1Q5TC82 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
RC3H1Q5TC82 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC28.84■■■□□ 2.21
RC3H1Q5TC82 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RC3H1Q5TC82 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RC3H1Q5TC82 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
RC3H1Q5TC82 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.82■■■□□ 2.2
RC3H1Q5TC82 AL499627.2-201ENST00000606283 725 ntBASIC28.82■■■□□ 2.2
RC3H1Q5TC82 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
RC3H1Q5TC82 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
RC3H1Q5TC82 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
RC3H1Q5TC82 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.82■■■□□ 2.2
RC3H1Q5TC82 AC133637.1-201ENST00000624115 1537 ntBASIC28.82■■■□□ 2.2
RC3H1Q5TC82 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC28.82■■■□□ 2.2
RC3H1Q5TC82 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RC3H1Q5TC82 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.81■■■□□ 2.2
RC3H1Q5TC82 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RC3H1Q5TC82 HLA-L-211ENST00000482052 1765 ntBASIC28.81■■■□□ 2.2
RC3H1Q5TC82 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
RC3H1Q5TC82 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC28.81■■■□□ 2.2
RC3H1Q5TC82 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC28.81■■■□□ 2.2
RC3H1Q5TC82 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
RC3H1Q5TC82 KRT18P14-201ENST00000534205 1250 ntBASIC28.81■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms