Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NID1P14543 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NID1P14543 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NID1P14543 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NID1P14543 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NID1P14543 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.81■□□□□ 0.92
NID1P14543 AC131212.1-201ENST00000613771 668 ntBASIC20.81■□□□□ 0.92
NID1P14543 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.81■□□□□ 0.92
NID1P14543 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NID1P14543 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
NID1P14543 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NID1P14543 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.81■□□□□ 0.92
NID1P14543 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NID1P14543 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NID1P14543 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NID1P14543 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.8■□□□□ 0.92
NID1P14543 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NID1P14543 C9orf163-202ENST00000624034 2573 ntBASIC20.8■□□□□ 0.92
NID1P14543 BX664725.1-201ENST00000438252 379 ntBASIC20.8■□□□□ 0.92
NID1P14543 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NID1P14543 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NID1P14543 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.8■□□□□ 0.92
NID1P14543 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NID1P14543 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NID1P14543 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NID1P14543 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NID1P14543 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NID1P14543 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NID1P14543 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NID1P14543 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
NID1P14543 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NID1P14543 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NID1P14543 GUSBP5-201ENST00000418136 578 ntBASIC20.79■□□□□ 0.92
NID1P14543 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.79■□□□□ 0.92
NID1P14543 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NID1P14543 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.79■□□□□ 0.92
NID1P14543 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.79■□□□□ 0.92
NID1P14543 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NID1P14543 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NID1P14543 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
NID1P14543 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NID1P14543 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.78■□□□□ 0.92
NID1P14543 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NID1P14543 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NID1P14543 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NID1P14543 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.78■□□□□ 0.92
NID1P14543 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NID1P14543 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NID1P14543 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NID1P14543 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.78■□□□□ 0.92
NID1P14543 AC239859.2-201ENST00000444165 318 ntBASIC20.78■□□□□ 0.92
NID1P14543 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.78■□□□□ 0.92
NID1P14543 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NID1P14543 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NID1P14543 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NID1P14543 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NID1P14543 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.78■□□□□ 0.92
NID1P14543 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
NID1P14543 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
NID1P14543 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NID1P14543 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.77■□□□□ 0.92
NID1P14543 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NID1P14543 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.77■□□□□ 0.92
NID1P14543 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
NID1P14543 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.77■□□□□ 0.92
NID1P14543 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.77■□□□□ 0.92
NID1P14543 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
NID1P14543 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NID1P14543 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NID1P14543 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NID1P14543 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NID1P14543 AC019069.1-201ENST00000610008 1333 ntBASIC20.77■□□□□ 0.91
NID1P14543 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.76■□□□□ 0.91
NID1P14543 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.76■□□□□ 0.91
NID1P14543 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.76■□□□□ 0.91
NID1P14543 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NID1P14543 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NID1P14543 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.76■□□□□ 0.91
NID1P14543 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.76■□□□□ 0.91
NID1P14543 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NID1P14543 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NID1P14543 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NID1P14543 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
NID1P14543 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.75■□□□□ 0.91
NID1P14543 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NID1P14543 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NID1P14543 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.75■□□□□ 0.91
NID1P14543 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.75■□□□□ 0.91
NID1P14543 MIR6722-201ENST00000617286 78 ntBASIC20.75■□□□□ 0.91
NID1P14543 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.75■□□□□ 0.91
NID1P14543 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NID1P14543 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.75■□□□□ 0.91
NID1P14543 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NID1P14543 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NID1P14543 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NID1P14543 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NID1P14543 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NID1P14543 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.74■□□□□ 0.91
NID1P14543 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.74■□□□□ 0.91
NID1P14543 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms