Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
COL5A2P05997 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC30.3■■■□□ 2.44
COL5A2P05997 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
COL5A2P05997 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.3■■■□□ 2.44
COL5A2P05997 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
COL5A2P05997 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
COL5A2P05997 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
COL5A2P05997 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
COL5A2P05997 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC30.3■■■□□ 2.44
COL5A2P05997 TERF1P2-201ENST00000583350 1212 ntBASIC30.3■■■□□ 2.44
COL5A2P05997 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC30.3■■■□□ 2.44
COL5A2P05997 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30.3■■■□□ 2.44
COL5A2P05997 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC30.29■■■□□ 2.44
COL5A2P05997 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC30.29■■■□□ 2.44
COL5A2P05997 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC30.29■■■□□ 2.44
COL5A2P05997 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC30.29■■■□□ 2.44
COL5A2P05997 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC30.29■■■□□ 2.44
COL5A2P05997 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
COL5A2P05997 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
COL5A2P05997 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
COL5A2P05997 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
COL5A2P05997 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC30.28■■■□□ 2.44
COL5A2P05997 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC30.28■■■□□ 2.44
COL5A2P05997 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC30.28■■■□□ 2.44
COL5A2P05997 KRT18P14-201ENST00000534205 1250 ntBASIC30.28■■■□□ 2.44
COL5A2P05997 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC30.28■■■□□ 2.44
COL5A2P05997 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
COL5A2P05997 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
COL5A2P05997 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC30.27■■■□□ 2.44
COL5A2P05997 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
COL5A2P05997 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
COL5A2P05997 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
COL5A2P05997 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
COL5A2P05997 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
COL5A2P05997 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
COL5A2P05997 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.25■■■□□ 2.43
COL5A2P05997 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
COL5A2P05997 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC30.25■■■□□ 2.43
COL5A2P05997 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
COL5A2P05997 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
COL5A2P05997 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
COL5A2P05997 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
COL5A2P05997 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC30.24■■■□□ 2.43
COL5A2P05997 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
COL5A2P05997 AC141586.4-201ENST00000624558 1573 ntBASIC30.24■■■□□ 2.43
COL5A2P05997 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
COL5A2P05997 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
COL5A2P05997 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC30.24■■■□□ 2.43
COL5A2P05997 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC30.24■■■□□ 2.43
COL5A2P05997 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC30.24■■■□□ 2.43
COL5A2P05997 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
COL5A2P05997 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
COL5A2P05997 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
COL5A2P05997 AL161729.1-201ENST00000604104 1402 ntBASIC30.23■■■□□ 2.43
COL5A2P05997 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
COL5A2P05997 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC30.21■■■□□ 2.43
COL5A2P05997 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC30.21■■■□□ 2.43
COL5A2P05997 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC30.21■■■□□ 2.43
COL5A2P05997 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
COL5A2P05997 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC30.21■■■□□ 2.43
COL5A2P05997 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
COL5A2P05997 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
COL5A2P05997 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
COL5A2P05997 NTF6G-201ENST00000591094 616 ntBASIC30.2■■■□□ 2.43
COL5A2P05997 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC30.2■■■□□ 2.43
COL5A2P05997 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
COL5A2P05997 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
COL5A2P05997 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
COL5A2P05997 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL5A2P05997 HLA-L-209ENST00000420110 1011 ntBASIC30.19■■■□□ 2.42
COL5A2P05997 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC30.19■■■□□ 2.42
COL5A2P05997 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC30.19■■■□□ 2.42
COL5A2P05997 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL5A2P05997 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
COL5A2P05997 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
COL5A2P05997 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC30.19■■■□□ 2.42
COL5A2P05997 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC30.19■■■□□ 2.42
COL5A2P05997 GXYLT1P2-201ENST00000433312 1230 ntBASIC30.19■■■□□ 2.42
COL5A2P05997 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC30.19■■■□□ 2.42
COL5A2P05997 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
COL5A2P05997 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC30.19■■■□□ 2.42
COL5A2P05997 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
COL5A2P05997 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC30.18■■■□□ 2.42
COL5A2P05997 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
COL5A2P05997 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
COL5A2P05997 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
COL5A2P05997 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
COL5A2P05997 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
COL5A2P05997 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
COL5A2P05997 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC30.17■■■□□ 2.42
COL5A2P05997 KRT18P61-201ENST00000585825 1298 ntBASIC30.17■■■□□ 2.42
COL5A2P05997 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
COL5A2P05997 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC30.17■■■□□ 2.42
COL5A2P05997 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL5A2P05997 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
COL5A2P05997 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL5A2P05997 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.16■■■□□ 2.42
COL5A2P05997 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.16■■■□□ 2.42
COL5A2P05997 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL5A2P05997 AC010525.1-201ENST00000585559 441 ntBASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms