Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SHISA7A6NL88 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SHISA7A6NL88 MIR6084-201ENST00000622012 110 ntBASIC23.09■■□□□ 1.29
SHISA7A6NL88 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.09■■□□□ 1.29
SHISA7A6NL88 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHISA7A6NL88 AC004911.1-201ENST00000416316 871 ntBASIC23.08■■□□□ 1.29
SHISA7A6NL88 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.08■■□□□ 1.29
SHISA7A6NL88 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SHISA7A6NL88 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
SHISA7A6NL88 AL358852.1-201ENST00000623174 1268 ntBASIC23.08■■□□□ 1.29
SHISA7A6NL88 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHISA7A6NL88 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SHISA7A6NL88 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SHISA7A6NL88 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHISA7A6NL88 MIR572-201ENST00000384983 95 ntBASIC23.07■■□□□ 1.28
SHISA7A6NL88 IGHV3-19-201ENST00000521488 291 ntBASIC23.07■■□□□ 1.28
SHISA7A6NL88 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHISA7A6NL88 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.07■■□□□ 1.28
SHISA7A6NL88 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SHISA7A6NL88 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.07■■□□□ 1.28
SHISA7A6NL88 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHISA7A6NL88 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHISA7A6NL88 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.06■■□□□ 1.28
SHISA7A6NL88 CCDC92B-201ENST00000575506 885 ntBASIC23.06■■□□□ 1.28
SHISA7A6NL88 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHISA7A6NL88 DUSP8P4-201ENST00000399538 1761 ntBASIC23.06■■□□□ 1.28
SHISA7A6NL88 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.06■■□□□ 1.28
SHISA7A6NL88 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHISA7A6NL88 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHISA7A6NL88 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHISA7A6NL88 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHISA7A6NL88 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.05■■□□□ 1.28
SHISA7A6NL88 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHISA7A6NL88 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.05■■□□□ 1.28
SHISA7A6NL88 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.05■■□□□ 1.28
SHISA7A6NL88 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.05■■□□□ 1.28
SHISA7A6NL88 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
SHISA7A6NL88 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.05■■□□□ 1.28
SHISA7A6NL88 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.05■■□□□ 1.28
SHISA7A6NL88 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SHISA7A6NL88 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
SHISA7A6NL88 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHISA7A6NL88 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHISA7A6NL88 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHISA7A6NL88 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.04■■□□□ 1.28
SHISA7A6NL88 AC012414.1-201ENST00000556676 535 ntBASIC23.04■■□□□ 1.28
SHISA7A6NL88 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.04■■□□□ 1.28
SHISA7A6NL88 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SHISA7A6NL88 AC141586.4-201ENST00000624558 1573 ntBASIC23.04■■□□□ 1.28
SHISA7A6NL88 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SHISA7A6NL88 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.04■■□□□ 1.28
SHISA7A6NL88 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.04■■□□□ 1.28
SHISA7A6NL88 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.04■■□□□ 1.28
SHISA7A6NL88 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SHISA7A6NL88 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHISA7A6NL88 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHISA7A6NL88 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHISA7A6NL88 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SHISA7A6NL88 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.03■■□□□ 1.28
SHISA7A6NL88 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
SHISA7A6NL88 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SHISA7A6NL88 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.03■■□□□ 1.28
SHISA7A6NL88 HLA-L-211ENST00000482052 1765 ntBASIC23.03■■□□□ 1.28
SHISA7A6NL88 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SHISA7A6NL88 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.03■■□□□ 1.28
SHISA7A6NL88 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHISA7A6NL88 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.02■■□□□ 1.28
SHISA7A6NL88 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SHISA7A6NL88 ID1-201ENST00000376105 1233 ntBASIC23.02■■□□□ 1.28
SHISA7A6NL88 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.02■■□□□ 1.28
SHISA7A6NL88 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.02■■□□□ 1.28
SHISA7A6NL88 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SHISA7A6NL88 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.02■■□□□ 1.28
SHISA7A6NL88 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SHISA7A6NL88 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.02■■□□□ 1.28
SHISA7A6NL88 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SHISA7A6NL88 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SHISA7A6NL88 AL161729.1-201ENST00000604104 1402 ntBASIC23.01■■□□□ 1.27
SHISA7A6NL88 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SHISA7A6NL88 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SHISA7A6NL88 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.01■■□□□ 1.27
SHISA7A6NL88 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SHISA7A6NL88 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SHISA7A6NL88 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.01■■□□□ 1.27
SHISA7A6NL88 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.01■■□□□ 1.27
SHISA7A6NL88 TERF1P2-201ENST00000583350 1212 ntBASIC23.01■■□□□ 1.27
SHISA7A6NL88 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SHISA7A6NL88 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SHISA7A6NL88 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
SHISA7A6NL88 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23■■□□□ 1.27
SHISA7A6NL88 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHISA7A6NL88 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23■■□□□ 1.27
SHISA7A6NL88 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SHISA7A6NL88 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23■■□□□ 1.27
SHISA7A6NL88 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
SHISA7A6NL88 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23■■□□□ 1.27
SHISA7A6NL88 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SHISA7A6NL88 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23■■□□□ 1.27
SHISA7A6NL88 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23■■□□□ 1.27
SHISA7A6NL88 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms