Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNTNAP3Q9BZ76 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNTNAP3Q9BZ76 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
CNTNAP3Q9BZ76 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNTNAP3Q9BZ76 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CNTNAP3Q9BZ76 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNTNAP3Q9BZ76 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 AL627095.1-201ENST00000414775 321 ntBASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 RN7SL838P-201ENST00000481676 295 ntBASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 AC005746.3-201ENST00000614751 393 ntBASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 AL590556.2-202ENST00000636906 844 ntBASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 TCAF2P1-201ENST00000291129 2421 ntBASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.66□□□□□ -0.22
CNTNAP3Q9BZ76 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 AC106785.2-201ENST00000564385 1319 ntBASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 REXO1L5P-201ENST00000622260 2098 ntBASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 OR10N1P-201ENST00000392758 869 ntBASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 HLA-K-203ENST00000430151 1046 ntBASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 CICP12-201ENST00000455801 843 ntBASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms