Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 SNRPD2P2-201ENST00000473818 333 ntBASIC15.44■□□□□ 0.06
LRCH3Q96II8 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 AC016582.2-202ENST00000587765 1094 ntBASIC15.44■□□□□ 0.06
LRCH3Q96II8 TYMSP2-201ENST00000589501 424 ntBASIC15.44■□□□□ 0.06
LRCH3Q96II8 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 AC092953.2-201ENST00000608000 699 ntBASIC15.44■□□□□ 0.06
LRCH3Q96II8 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 AC048344.4-201ENST00000619744 527 ntBASIC15.44■□□□□ 0.06
LRCH3Q96II8 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LRCH3Q96II8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH3Q96II8 AC105250.1-201ENST00000509378 2057 ntBASIC15.44■□□□□ 0.06
LRCH3Q96II8 AC009090.5-201ENST00000624886 2285 ntBASIC15.43■□□□□ 0.06
LRCH3Q96II8 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 OR7E115P-201ENST00000382617 1024 ntBASIC15.43■□□□□ 0.06
LRCH3Q96II8 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 AP000244.1-201ENST00000424582 201 ntBASIC15.43■□□□□ 0.06
LRCH3Q96II8 YY1P1-201ENST00000427625 668 ntBASIC15.43■□□□□ 0.06
LRCH3Q96II8 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 MIEF1-215ENST00000637854 213 ntBASIC15.43■□□□□ 0.06
LRCH3Q96II8 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.43■□□□□ 0.06
LRCH3Q96II8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 PKD1P5-201ENST00000532415 10291 ntBASIC15.43■□□□□ 0.06
LRCH3Q96II8 AL009178.2-201ENST00000597278 2719 ntBASIC15.43■□□□□ 0.06
LRCH3Q96II8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LRCH3Q96II8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRCH3Q96II8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
LRCH3Q96II8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRCH3Q96II8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LRCH3Q96II8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRCH3Q96II8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
LRCH3Q96II8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.42■□□□□ 0.06
LRCH3Q96II8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms