Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 BRI3BPP1-201ENST00000594224 787 ntBASIC16.39■□□□□ 0.21
CLCN1P35523 AC107373.2-201ENST00000607735 490 ntBASIC16.39■□□□□ 0.21
CLCN1P35523 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN1P35523 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLCN1P35523 AL360270.3-201ENST00000609118 1348 ntBASIC16.39■□□□□ 0.21
CLCN1P35523 AC093525.8-201ENST00000624099 1342 ntBASIC16.39■□□□□ 0.21
CLCN1P35523 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN1P35523 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLCN1P35523 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLCN1P35523 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN1P35523 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLCN1P35523 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLCN1P35523 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CLCN1P35523 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN1P35523 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN1P35523 AL138799.1-201ENST00000448213 1675 ntBASIC16.38■□□□□ 0.21
CLCN1P35523 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.38■□□□□ 0.21
CLCN1P35523 MEP1AP4-201ENST00000423244 1087 ntBASIC16.38■□□□□ 0.21
CLCN1P35523 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN1P35523 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CLCN1P35523 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.38■□□□□ 0.21
CLCN1P35523 RRP7BP-205ENST00000566851 833 ntBASIC16.38■□□□□ 0.21
CLCN1P35523 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.38■□□□□ 0.21
CLCN1P35523 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN1P35523 AC099568.2-201ENST00000609194 695 ntBASIC16.38■□□□□ 0.21
CLCN1P35523 AC009118.2-201ENST00000613275 655 ntBASIC16.38■□□□□ 0.21
CLCN1P35523 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN1P35523 AJ011932.1-201ENST00000621707 465 ntBASIC16.38■□□□□ 0.21
CLCN1P35523 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN1P35523 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLCN1P35523 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN1P35523 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.38■□□□□ 0.21
CLCN1P35523 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN1P35523 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLCN1P35523 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.38■□□□□ 0.21
CLCN1P35523 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CLCN1P35523 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLCN1P35523 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN1P35523 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CLCN1P35523 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN1P35523 AL353779.1-201ENST00000434793 351 ntBASIC16.37■□□□□ 0.21
CLCN1P35523 TSPY16P-201ENST00000449843 468 ntBASIC16.37■□□□□ 0.21
CLCN1P35523 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.37■□□□□ 0.21
CLCN1P35523 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCN1P35523 AC093004.1-201ENST00000508850 424 ntBASIC16.37■□□□□ 0.21
CLCN1P35523 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCN1P35523 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN1P35523 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CLCN1P35523 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.37■□□□□ 0.21
CLCN1P35523 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC16.37■□□□□ 0.21
CLCN1P35523 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.37■□□□□ 0.21
CLCN1P35523 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN1P35523 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CLCN1P35523 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN1P35523 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN1P35523 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 MYADML-201ENST00000474610 2147 ntBASIC16.37■□□□□ 0.21
CLCN1P35523 AL645937.6-201ENST00000641122 3727 ntBASIC16.37■□□□□ 0.21
CLCN1P35523 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms