Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 AC126915.1-201ENST00000522847 1038 ntBASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 NDUFV2P1-201ENST00000596415 907 ntBASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 MIR7845-201ENST00000618396 99 ntBASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 AC041040.2-201ENST00000622926 2899 ntBASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CUEDC1Q9NWM3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 AC016397.2-201ENST00000624848 1985 ntBASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 AL451050.2-201ENST00000606967 682 ntBASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 AC104506.1-201ENST00000609247 429 ntBASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 AC090164.2-201ENST00000611487 516 ntBASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 AC091812.3-201ENST00000621362 345 ntBASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CUEDC1Q9NWM3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CUEDC1Q9NWM3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CUEDC1Q9NWM3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CUEDC1Q9NWM3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.96□□□□□ -0.18
CUEDC1Q9NWM3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CUEDC1Q9NWM3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CUEDC1Q9NWM3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CUEDC1Q9NWM3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
CUEDC1Q9NWM3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CUEDC1Q9NWM3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 AC018629.1-201ENST00000623381 1736 ntBASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 HNRNPA1P23-201ENST00000491091 1133 ntBASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 AC003686.1-201ENST00000550956 1034 ntBASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 RN7SL163P-201ENST00000583100 276 ntBASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms