Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.46□□□□□ -0.25
NUP43Q8NFH3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.46□□□□□ -0.25
NUP43Q8NFH3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.46□□□□□ -0.25
NUP43Q8NFH3 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.46□□□□□ -0.25
NUP43Q8NFH3 AC090386.2-201ENST00000623010 1039 ntBASIC13.46□□□□□ -0.25
NUP43Q8NFH3 AC079416.2-201ENST00000625035 1193 ntBASIC13.46□□□□□ -0.25
NUP43Q8NFH3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.46□□□□□ -0.25
NUP43Q8NFH3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NUP43Q8NFH3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
NUP43Q8NFH3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NUP43Q8NFH3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NUP43Q8NFH3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NUP43Q8NFH3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
NUP43Q8NFH3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NUP43Q8NFH3 KRT8P29-201ENST00000420409 1371 ntBASIC13.45□□□□□ -0.26
NUP43Q8NFH3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 GK-202ENST00000378941 458 ntTSL 3 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 BTBD6P1-201ENST00000412176 1267 ntBASIC13.45□□□□□ -0.26
NUP43Q8NFH3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 PGAM1P5-201ENST00000548011 764 ntBASIC13.45□□□□□ -0.26
NUP43Q8NFH3 AC003686.1-201ENST00000550956 1034 ntBASIC13.45□□□□□ -0.26
NUP43Q8NFH3 AC140658.4-201ENST00000561990 352 ntBASIC13.45□□□□□ -0.26
NUP43Q8NFH3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 AC008805.1-201ENST00000590892 364 ntBASIC13.45□□□□□ -0.26
NUP43Q8NFH3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.45□□□□□ -0.26
NUP43Q8NFH3 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.45□□□□□ -0.26
NUP43Q8NFH3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.45□□□□□ -0.26
NUP43Q8NFH3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
NUP43Q8NFH3 CCT8L1P-201ENST00000465400 1674 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms