Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 SPTLC1P3-201ENST00000403408 259 ntBASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 SNX20-205ENST00000610485 557 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AL928654.5-201ENST00000624831 2501 ntBASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 GBAP1-208ENST00000566701 1546 ntBASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 SNORA30.1-201ENST00000363193 129 ntBASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AC023051.2-201ENST00000541141 460 ntBASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 TNRC18P2-201ENST00000417666 2714 ntBASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 DERL2-206ENST00000572834 589 ntTSL 3 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AP000553.2-201ENST00000609038 441 ntBASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AC139100.2-201ENST00000616901 662 ntBASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 HSPA7-201ENST00000445535 1927 ntBASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 AC046158.3-201ENST00000624947 2558 ntBASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS13DQ5THJ4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 RN7SL33P-201ENST00000462543 342 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 METTL23-211ENST00000589977 617 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 AC009812.1-201ENST00000605948 1059 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 AC009118.3-201ENST00000622896 873 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 OLA1P2-201ENST00000395519 1264 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 DKKL1P1-201ENST00000400550 698 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 RN7SL340P-201ENST00000470792 296 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 FAM86JP-202ENST00000484500 988 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 AC103724.2-201ENST00000520355 476 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms