Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 AL121723.1-201ENST00000445194 1519 ntBASIC12.59□□□□□ -0.39
DEFA3P59666 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
DEFA3P59666 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
DEFA3P59666 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC12.59□□□□□ -0.39
DEFA3P59666 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.59□□□□□ -0.39
DEFA3P59666 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
DEFA3P59666 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
DEFA3P59666 RPS2P1-201ENST00000434010 821 ntBASIC12.59□□□□□ -0.39
DEFA3P59666 HIST3H2BA-201ENST00000436555 524 ntBASIC12.59□□□□□ -0.39
DEFA3P59666 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.59□□□□□ -0.39
DEFA3P59666 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.59□□□□□ -0.39
DEFA3P59666 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
DEFA3P59666 AC096734.2-201ENST00000562054 433 ntBASIC12.59□□□□□ -0.39
DEFA3P59666 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
DEFA3P59666 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.59□□□□□ -0.39
DEFA3P59666 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.59□□□□□ -0.39
DEFA3P59666 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC12.59□□□□□ -0.39
DEFA3P59666 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
DEFA3P59666 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
DEFA3P59666 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
DEFA3P59666 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.59□□□□□ -0.39
DEFA3P59666 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
DEFA3P59666 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.59□□□□□ -0.39
DEFA3P59666 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
DEFA3P59666 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.59□□□□□ -0.39
DEFA3P59666 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
DEFA3P59666 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
DEFA3P59666 SALL4P5-201ENST00000419001 1760 ntBASIC12.58□□□□□ -0.39
DEFA3P59666 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
DEFA3P59666 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC12.58□□□□□ -0.39
DEFA3P59666 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
DEFA3P59666 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.58□□□□□ -0.39
DEFA3P59666 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 AC092123.2-201ENST00000611189 5421 ntBASIC12.58□□□□□ -0.4
DEFA3P59666 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.58□□□□□ -0.4
DEFA3P59666 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 AC145098.2-201ENST00000623593 3026 ntBASIC12.58□□□□□ -0.4
DEFA3P59666 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.58□□□□□ -0.4
DEFA3P59666 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.58□□□□□ -0.4
DEFA3P59666 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.58□□□□□ -0.4
DEFA3P59666 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
DEFA3P59666 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
DEFA3P59666 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
DEFA3P59666 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
DEFA3P59666 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
DEFA3P59666 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.58□□□□□ -0.4
DEFA3P59666 HLA-K-203ENST00000430151 1046 ntBASIC12.58□□□□□ -0.4
DEFA3P59666 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.58□□□□□ -0.4
DEFA3P59666 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.58□□□□□ -0.4
DEFA3P59666 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.58□□□□□ -0.4
DEFA3P59666 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.58□□□□□ -0.4
DEFA3P59666 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.58□□□□□ -0.4
DEFA3P59666 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.58□□□□□ -0.4
DEFA3P59666 LINC02084-201ENST00000606069 1096 ntBASIC12.58□□□□□ -0.4
DEFA3P59666 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
DEFA3P59666 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
DEFA3P59666 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.58□□□□□ -0.4
DEFA3P59666 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.58□□□□□ -0.4
DEFA3P59666 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.58□□□□□ -0.4
DEFA3P59666 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.58□□□□□ -0.4
DEFA3P59666 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
DEFA3P59666 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
DEFA3P59666 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
DEFA3P59666 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
DEFA3P59666 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.58□□□□□ -0.4
DEFA3P59666 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
DEFA3P59666 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms