Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2B1P20020 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
ATP2B1P20020 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ATP2B1P20020 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ATP2B1P20020 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ATP2B1P20020 AL645933.1-201ENST00000440087 609 ntBASIC16.63■□□□□ 0.25
ATP2B1P20020 RNA5SP412-201ENST00000516234 123 ntBASIC16.63■□□□□ 0.25
ATP2B1P20020 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ATP2B1P20020 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2B1P20020 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2B1P20020 AC005962.1-201ENST00000584100 773 ntBASIC16.63■□□□□ 0.25
ATP2B1P20020 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP2B1P20020 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2B1P20020 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ATP2B1P20020 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2B1P20020 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ATP2B1P20020 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ATP2B1P20020 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ATP2B1P20020 TP73-211ENST00000604074 4806 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2B1P20020 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2B1P20020 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2B1P20020 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2B1P20020 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2B1P20020 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2B1P20020 AL365181.3-201ENST00000605886 3222 ntBASIC16.62■□□□□ 0.25
ATP2B1P20020 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2B1P20020 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
ATP2B1P20020 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATP2B1P20020 AC015818.8-201ENST00000587907 1519 ntBASIC16.62■□□□□ 0.25
ATP2B1P20020 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2B1P20020 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2B1P20020 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP2B1P20020 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2B1P20020 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2B1P20020 AL157407.1-201ENST00000435784 904 ntBASIC16.62■□□□□ 0.25
ATP2B1P20020 MTX1P1-201ENST00000440904 838 ntBASIC16.62■□□□□ 0.25
ATP2B1P20020 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2B1P20020 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.62■□□□□ 0.25
ATP2B1P20020 AL583810.1-201ENST00000553344 1045 ntBASIC16.62■□□□□ 0.25
ATP2B1P20020 AC005730.2-201ENST00000564549 1184 ntBASIC16.62■□□□□ 0.25
ATP2B1P20020 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.62■□□□□ 0.25
ATP2B1P20020 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.62■□□□□ 0.25
ATP2B1P20020 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP2B1P20020 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATP2B1P20020 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATP2B1P20020 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2B1P20020 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2B1P20020 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2B1P20020 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2B1P20020 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP2B1P20020 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ATP2B1P20020 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2B1P20020 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2B1P20020 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
ATP2B1P20020 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2B1P20020 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP2B1P20020 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ATP2B1P20020 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ATP2B1P20020 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 AL157996.1-201ENST00000624684 2299 ntBASIC16.61■□□□□ 0.25
ATP2B1P20020 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP2B1P20020 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP2B1P20020 AL161932.2-201ENST00000435436 679 ntBASIC16.61■□□□□ 0.25
ATP2B1P20020 Z93015.1-201ENST00000451718 390 ntBASIC16.61■□□□□ 0.25
ATP2B1P20020 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.61■□□□□ 0.25
ATP2B1P20020 RPSAP36-202ENST00000494591 1261 ntBASIC16.61■□□□□ 0.25
ATP2B1P20020 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
ATP2B1P20020 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP2B1P20020 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP2B1P20020 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.61■□□□□ 0.25
ATP2B1P20020 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ATP2B1P20020 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP2B1P20020 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ATP2B1P20020 AL022313.4-201ENST00000562756 2046 ntBASIC16.61■□□□□ 0.25
ATP2B1P20020 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2B1P20020 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
ATP2B1P20020 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms