Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TPM1P09493 AC005252.2-201ENST00000624630 1141 ntBASIC15.92■□□□□ 0.14
TPM1P09493 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.92■□□□□ 0.14
TPM1P09493 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM1P09493 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
TPM1P09493 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC15.92■□□□□ 0.14
TPM1P09493 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM1P09493 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
TPM1P09493 FKBP4P6-201ENST00000457486 1332 ntBASIC15.92■□□□□ 0.14
TPM1P09493 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TPM1P09493 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
TPM1P09493 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM1P09493 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
TPM1P09493 AC020910.5-201ENST00000623668 1865 ntBASIC15.91■□□□□ 0.14
TPM1P09493 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TPM1P09493 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TPM1P09493 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.91■□□□□ 0.14
TPM1P09493 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TPM1P09493 ARSEP1-201ENST00000420443 635 ntBASIC15.91■□□□□ 0.14
TPM1P09493 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 FTLP10-202ENST00000505798 471 ntBASIC15.91■□□□□ 0.14
TPM1P09493 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM1P09493 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
TPM1P09493 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TPM1P09493 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TPM1P09493 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TPM1P09493 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TPM1P09493 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
TPM1P09493 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TPM1P09493 CLUHP2-201ENST00000426660 1303 ntBASIC15.91■□□□□ 0.14
TPM1P09493 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM1P09493 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.91■□□□□ 0.14
TPM1P09493 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM1P09493 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TPM1P09493 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC15.91■□□□□ 0.14
TPM1P09493 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC15.9■□□□□ 0.14
TPM1P09493 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
TPM1P09493 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.9■□□□□ 0.14
TPM1P09493 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TPM1P09493 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 AL365181.3-201ENST00000605886 3222 ntBASIC15.9■□□□□ 0.14
TPM1P09493 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TPM1P09493 AC123567.1-201ENST00000548294 1261 ntBASIC15.9■□□□□ 0.14
TPM1P09493 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.9■□□□□ 0.14
TPM1P09493 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.9■□□□□ 0.14
TPM1P09493 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.9■□□□□ 0.14
TPM1P09493 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.9■□□□□ 0.14
TPM1P09493 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TPM1P09493 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.9■□□□□ 0.14
TPM1P09493 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC15.9■□□□□ 0.14
TPM1P09493 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC15.9■□□□□ 0.14
TPM1P09493 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.9■□□□□ 0.14
TPM1P09493 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms