Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 RN7SL564P-201ENST00000496309 250 ntBASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 MIR4472-1-201ENST00000584349 80 ntBASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 MIR6074-201ENST00000612054 107 ntBASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 AL451007.2-201ENST00000632004 563 ntBASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 AC140479.7-201ENST00000636301 2332 ntBASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 MIR1227-201ENST00000408484 88 ntBASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 BX679664.3-201ENST00000414070 555 ntBASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 PPP1R2P4-201ENST00000424051 595 ntBASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 BCAS2P2-201ENST00000425064 674 ntBASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 AC113935.1-201ENST00000471722 555 ntBASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 AC093909.3-201ENST00000504783 336 ntBASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 AC226150.1-201ENST00000544259 466 ntBASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 KLF17P1-201ENST00000547105 1126 ntBASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 AC145285.5-201ENST00000562217 361 ntBASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 AC005357.2-202ENST00000590507 1060 ntBASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 AC138466.4-201ENST00000623965 852 ntBASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 AC025183.3-201ENST00000623526 1482 ntBASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.86□□□□□ -0.03
DNMT3BQ9UBC3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms