Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 SERPINA13P-202ENST00000478994 924 ntBASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 AC005740.2-201ENST00000511085 419 ntBASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 AP001258.2-201ENST00000529891 490 ntBASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 BNIP3P13-201ENST00000599968 566 ntBASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 MIR6869-201ENST00000619434 62 ntBASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 MIR6799-201ENST00000620297 69 ntBASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 AC004923.1-202ENST00000642106 209 ntBASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PARPBPQ9NWS1 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
PARPBPQ9NWS1 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 FAM86MP-201ENST00000340703 885 ntBASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 AC007274.1-201ENST00000439805 662 ntBASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 AL645933.1-201ENST00000440087 609 ntBASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 RNMTL1P1-201ENST00000454103 560 ntBASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 AC005730.2-201ENST00000564549 1184 ntBASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 AC008805.1-201ENST00000590892 364 ntBASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 AL118558.3-201ENST00000607414 1079 ntBASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 Z98259.2-201ENST00000641583 609 ntBASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 AC004899.1-201ENST00000424687 1714 ntBASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PARPBPQ9NWS1 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms