Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 AC079776.1-201ENST00000401540 1152 ntBASIC12.89□□□□□ -0.35
LRRC28Q86X40 ARSEP1-201ENST00000420443 635 ntBASIC12.89□□□□□ -0.35
LRRC28Q86X40 AC012441.1-201ENST00000446669 685 ntBASIC12.89□□□□□ -0.35
LRRC28Q86X40 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 AC022137.2-201ENST00000503482 481 ntBASIC12.89□□□□□ -0.35
LRRC28Q86X40 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 AC135782.3-201ENST00000562782 2105 ntBASIC12.88□□□□□ -0.35
LRRC28Q86X40 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 AL645937.2-201ENST00000396808 931 ntBASIC12.88□□□□□ -0.35
LRRC28Q86X40 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.88□□□□□ -0.35
LRRC28Q86X40 BOLA2P3-201ENST00000404566 256 ntBASIC12.88□□□□□ -0.35
LRRC28Q86X40 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.88□□□□□ -0.35
LRRC28Q86X40 HLA-K-203ENST00000430151 1046 ntBASIC12.88□□□□□ -0.35
LRRC28Q86X40 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 AC244107.1-201ENST00000442033 332 ntBASIC12.88□□□□□ -0.35
LRRC28Q86X40 AL355864.2-201ENST00000447420 863 ntBASIC12.88□□□□□ -0.35
LRRC28Q86X40 ACA64.2-201ENST00000459014 129 ntBASIC12.88□□□□□ -0.35
LRRC28Q86X40 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 AP001889.1-201ENST00000525414 633 ntBASIC12.88□□□□□ -0.35
LRRC28Q86X40 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.88□□□□□ -0.35
LRRC28Q86X40 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRRC28Q86X40 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms