Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.18□□□□□ -0.46
SSBP1Q04837 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.18□□□□□ -0.46
SSBP1Q04837 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SSBP1Q04837 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.18□□□□□ -0.46
SSBP1Q04837 TREML5P-201ENST00000421694 576 ntBASIC12.18□□□□□ -0.46
SSBP1Q04837 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.18□□□□□ -0.46
SSBP1Q04837 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.18□□□□□ -0.46
SSBP1Q04837 AL035414.1-201ENST00000451327 857 ntBASIC12.18□□□□□ -0.46
SSBP1Q04837 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.18□□□□□ -0.46
SSBP1Q04837 KRT18P25-201ENST00000508931 1278 ntBASIC12.18□□□□□ -0.46
SSBP1Q04837 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.18□□□□□ -0.46
SSBP1Q04837 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.18□□□□□ -0.46
SSBP1Q04837 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
SSBP1Q04837 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.18□□□□□ -0.46
SSBP1Q04837 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.18□□□□□ -0.46
SSBP1Q04837 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.18□□□□□ -0.46
SSBP1Q04837 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.18□□□□□ -0.46
SSBP1Q04837 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.18□□□□□ -0.46
SSBP1Q04837 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.18□□□□□ -0.46
SSBP1Q04837 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SSBP1Q04837 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SSBP1Q04837 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SSBP1Q04837 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SSBP1Q04837 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 AC004899.2-201ENST00000622993 3860 ntBASIC12.17□□□□□ -0.46
SSBP1Q04837 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SSBP1Q04837 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 CLUHP2-201ENST00000426660 1303 ntBASIC12.17□□□□□ -0.46
SSBP1Q04837 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SSBP1Q04837 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP1Q04837 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SSBP1Q04837 RCC2P1-201ENST00000452257 1476 ntBASIC12.17□□□□□ -0.46
SSBP1Q04837 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SSBP1Q04837 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.17□□□□□ -0.46
SSBP1Q04837 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.17□□□□□ -0.46
SSBP1Q04837 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.17□□□□□ -0.46
SSBP1Q04837 MEP1AP4-201ENST00000423244 1087 ntBASIC12.17□□□□□ -0.46
SSBP1Q04837 AC245100.3-201ENST00000441281 285 ntBASIC12.17□□□□□ -0.46
SSBP1Q04837 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.17□□□□□ -0.46
SSBP1Q04837 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SSBP1Q04837 FTLP10-202ENST00000505798 471 ntBASIC12.17□□□□□ -0.46
SSBP1Q04837 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.17□□□□□ -0.46
SSBP1Q04837 AC068587.3-201ENST00000526613 355 ntBASIC12.17□□□□□ -0.46
SSBP1Q04837 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP1Q04837 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.17□□□□□ -0.46
SSBP1Q04837 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.17□□□□□ -0.46
SSBP1Q04837 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SSBP1Q04837 PTPRVP-205ENST00000641549 5067 ntBASIC12.17□□□□□ -0.46
SSBP1Q04837 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms