Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 FAM90A23P-201ENST00000400136 1395 ntBASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 AL008718.2-201ENST00000609206 1313 ntBASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 AC041040.2-201ENST00000622926 2899 ntBASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 COX20P1-201ENST00000366529 357 ntBASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 AC012497.1-201ENST00000429392 575 ntBASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 NUDT4P2-201ENST00000578341 546 ntBASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 AC104506.1-201ENST00000609247 429 ntBASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 GRK6P1-201ENST00000400595 1711 ntBASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 IL9RP3-201ENST00000442856 1674 ntBASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HPS5Q9UPZ3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 MST1P2-201ENST00000457982 2291 ntBASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 GCSHP3-201ENST00000431120 391 ntBASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 AC092638.2-201ENST00000441105 947 ntBASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 LINC01783-202ENST00000614408 828 ntBASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 BX284668.2-205ENST00000619677 828 ntBASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 MBLAC2-202ENST00000514906 1936 ntBASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 NORAD-201ENST00000565493 5339 ntBASIC17.05■□□□□ 0.32
HPS5Q9UPZ3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS5Q9UPZ3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.04■□□□□ 0.32
HPS5Q9UPZ3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HPS5Q9UPZ3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS5Q9UPZ3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS5Q9UPZ3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS5Q9UPZ3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HPS5Q9UPZ3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms