Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 AL161932.2-201ENST00000435436 679 ntBASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 MTND6P24-201ENST00000440466 518 ntBASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 AC069335.1-201ENST00000489972 472 ntBASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 AC079776.4-201ENST00000511039 504 ntBASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 AL079307.3-201ENST00000556114 283 ntBASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 LINC02084-201ENST00000606069 1096 ntBASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 AC091812.2-201ENST00000619081 385 ntBASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 PEG13-201ENST00000631594 5667 ntBASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 USB1-207ENST00000563149 1751 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 AL731571.1-201ENST00000617058 5428 ntBASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 PRELID1P1-202ENST00000567272 903 ntBASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 AC004461.2-201ENST00000629517 803 ntBASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 AL033527.5-202ENST00000641632 1098 ntBASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 AC092902.6-201ENST00000641783 218 ntBASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 AC092865.6-201ENST00000642101 219 ntBASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms