Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 AL080243.1-201ENST00000423293 1060 ntBASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 RN7SL147P-201ENST00000487345 298 ntBASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 RN7SL288P-201ENST00000490496 291 ntBASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 MIR5001-201ENST00000580185 100 ntBASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 AC005274.1-201ENST00000623460 802 ntBASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 MME-218ENST00000625667 363 ntTSL 5 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 AC113367.3-201ENST00000508316 1912 ntBASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 TNRC18P2-201ENST00000417666 2714 ntBASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 CICP24-201ENST00000605464 2705 ntBASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 OR10N1P-201ENST00000392758 869 ntBASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 AC092570.1-201ENST00000414446 469 ntBASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 HNRNPA1P2-207ENST00000432375 960 ntBASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 RARS-210ENST00000626454 177 ntTSL 5 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 AC046158.3-201ENST00000624947 2558 ntBASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RTFDC1Q9BY42 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RTFDC1Q9BY42 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.14■□□□□ 0.34
RTFDC1Q9BY42 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 ABCD1P4-201ENST00000399687 604 ntBASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 AL049840.2-201ENST00000602722 535 ntBASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RTFDC1Q9BY42 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms