Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 MIR770-201ENST00000390219 98 ntBASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 TSPY16P-201ENST00000449843 468 ntBASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 CLUHP6-201ENST00000580789 941 ntBASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 CHCHD2P3-201ENST00000603038 451 ntBASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
DNAAF1Q8NEP3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DNAAF1Q8NEP3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 268.4 ms