Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC104989.1-201ENST00000519711 778 ntBASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 AC124068.2-201ENST00000569473 1109 ntBASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 MIR4783-201ENST00000580343 82 ntBASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 Z98259.2-201ENST00000641583 609 ntBASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 KLF2P1-201ENST00000447438 1042 ntBASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 GAPDHP21-201ENST00000450301 1010 ntBASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 EEF1DP1-201ENST00000585891 896 ntBASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 LINC02084-201ENST00000606069 1096 ntBASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 AL162426.1-201ENST00000624141 743 ntBASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL3Q8IVW4 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDKL3Q8IVW4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms