Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC14.48□□□□□ -0.09
LTBRP36941 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC14.48□□□□□ -0.09
LTBRP36941 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
LTBRP36941 NF1P11-201ENST00000621292 1282 ntBASIC14.48□□□□□ -0.09
LTBRP36941 MEP1AP1-201ENST00000636082 1097 ntBASIC14.48□□□□□ -0.09
LTBRP36941 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
LTBRP36941 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LTBRP36941 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LTBRP36941 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LTBRP36941 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.48□□□□□ -0.09
LTBRP36941 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LTBRP36941 AL121753.2-201ENST00000624581 1461 ntBASIC14.48□□□□□ -0.09
LTBRP36941 AL109954.1-202ENST00000564051 2148 ntBASIC14.48□□□□□ -0.09
LTBRP36941 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LTBRP36941 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.48□□□□□ -0.09
LTBRP36941 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LTBRP36941 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LTBRP36941 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LTBRP36941 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.48□□□□□ -0.09
LTBRP36941 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.48□□□□□ -0.09
LTBRP36941 AC011498.7-201ENST00000624986 2027 ntBASIC14.48□□□□□ -0.09
LTBRP36941 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LTBRP36941 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC14.47□□□□□ -0.09
LTBRP36941 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.47□□□□□ -0.09
LTBRP36941 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LTBRP36941 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LTBRP36941 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LTBRP36941 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 AGAP7P-201ENST00000582299 2062 ntBASIC14.47□□□□□ -0.09
LTBRP36941 AGAP14-201ENST00000624701 2060 ntBASIC14.47□□□□□ -0.09
LTBRP36941 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC14.47□□□□□ -0.09
LTBRP36941 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LTBRP36941 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LTBRP36941 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 RPL29P2-201ENST00000488409 460 ntBASIC14.47□□□□□ -0.09
LTBRP36941 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC14.47□□□□□ -0.09
LTBRP36941 MYL6-215ENST00000549566 685 ntTSL 2 BASIC14.47□□□□□ -0.09
LTBRP36941 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC14.47□□□□□ -0.09
LTBRP36941 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.47□□□□□ -0.09
LTBRP36941 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC14.47□□□□□ -0.09
LTBRP36941 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.47□□□□□ -0.09
LTBRP36941 PRR20FP-201ENST00000603320 180 ntBASIC14.47□□□□□ -0.09
LTBRP36941 AC123912.6-201ENST00000612657 315 ntBASIC14.47□□□□□ -0.09
LTBRP36941 BX322562.1-201ENST00000617004 561 ntBASIC14.47□□□□□ -0.09
LTBRP36941 AC026120.2-201ENST00000617239 309 ntBASIC14.47□□□□□ -0.09
LTBRP36941 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.47□□□□□ -0.09
LTBRP36941 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC14.47□□□□□ -0.09
LTBRP36941 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.47□□□□□ -0.09
LTBRP36941 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 PPT1-215ENST00000641471 2368 ntBASIC14.47□□□□□ -0.09
LTBRP36941 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LTBRP36941 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.47□□□□□ -0.09
LTBRP36941 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LTBRP36941 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LTBRP36941 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LTBRP36941 AC064850.1-201ENST00000413279 1398 ntBASIC14.47□□□□□ -0.09
LTBRP36941 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC14.46□□□□□ -0.09
LTBRP36941 AC103702.1-201ENST00000548801 2630 ntBASIC14.46□□□□□ -0.09
LTBRP36941 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
LTBRP36941 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
LTBRP36941 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC14.46□□□□□ -0.09
LTBRP36941 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 MPV17-209ENST00000405983 859 ntTSL 5 BASIC14.46□□□□□ -0.09
LTBRP36941 HMGA1P1-201ENST00000415560 1062 ntBASIC14.46□□□□□ -0.09
LTBRP36941 AC007679.1-201ENST00000458609 502 ntBASIC14.46□□□□□ -0.09
LTBRP36941 AC104212.2-201ENST00000478813 628 ntBASIC14.46□□□□□ -0.09
LTBRP36941 MARK2P17-201ENST00000498560 841 ntBASIC14.46□□□□□ -0.09
LTBRP36941 AC090820.1-201ENST00000519722 591 ntBASIC14.46□□□□□ -0.09
LTBRP36941 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.46□□□□□ -0.09
LTBRP36941 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.46□□□□□ -0.09
LTBRP36941 AC010202.1-201ENST00000551181 405 ntBASIC14.46□□□□□ -0.09
LTBRP36941 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms