Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AL645937.2-201ENST00000396808 931 ntBASIC17.3■□□□□ 0.36
NCLP19338 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
NCLP19338 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 RN7SL752P-201ENST00000463779 287 ntBASIC17.3■□□□□ 0.36
NCLP19338 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 ELK1P1-201ENST00000485699 580 ntBASIC17.3■□□□□ 0.36
NCLP19338 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.3■□□□□ 0.36
NCLP19338 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.3■□□□□ 0.36
NCLP19338 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NCLP19338 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NCLP19338 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NCLP19338 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC17.3■□□□□ 0.36
NCLP19338 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.29■□□□□ 0.36
NCLP19338 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NCLP19338 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC17.29■□□□□ 0.36
NCLP19338 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.29■□□□□ 0.36
NCLP19338 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NCLP19338 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.29■□□□□ 0.36
NCLP19338 AC098850.1-201ENST00000419919 790 ntBASIC17.29■□□□□ 0.36
NCLP19338 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.29■□□□□ 0.36
NCLP19338 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.29■□□□□ 0.36
NCLP19338 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.29■□□□□ 0.36
NCLP19338 INE1-201ENST00000456273 945 ntBASIC17.29■□□□□ 0.36
NCLP19338 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.29■□□□□ 0.36
NCLP19338 TMEM198B-204ENST00000484016 896 ntBASIC17.29■□□□□ 0.36
NCLP19338 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.29■□□□□ 0.36
NCLP19338 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.29■□□□□ 0.36
NCLP19338 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.29■□□□□ 0.36
NCLP19338 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NCLP19338 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC17.29■□□□□ 0.36
NCLP19338 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC17.29■□□□□ 0.36
NCLP19338 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC17.29■□□□□ 0.36
NCLP19338 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NCLP19338 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
NCLP19338 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.29■□□□□ 0.36
NCLP19338 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NCLP19338 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC17.29■□□□□ 0.36
NCLP19338 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NCLP19338 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC17.29■□□□□ 0.36
NCLP19338 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCLP19338 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCLP19338 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NCLP19338 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.28■□□□□ 0.36
NCLP19338 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCLP19338 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC17.28■□□□□ 0.36
NCLP19338 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NCLP19338 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCLP19338 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.28■□□□□ 0.36
NCLP19338 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.28■□□□□ 0.36
NCLP19338 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCLP19338 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCLP19338 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCLP19338 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCLP19338 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.28■□□□□ 0.36
NCLP19338 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.28■□□□□ 0.36
NCLP19338 AC007274.1-201ENST00000439805 662 ntBASIC17.28■□□□□ 0.36
NCLP19338 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.28■□□□□ 0.36
NCLP19338 AC011495.1-201ENST00000498085 584 ntBASIC17.28■□□□□ 0.36
NCLP19338 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.28■□□□□ 0.36
NCLP19338 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.28■□□□□ 0.36
NCLP19338 CTBP2P3-201ENST00000585629 1255 ntBASIC17.28■□□□□ 0.36
NCLP19338 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.28■□□□□ 0.36
NCLP19338 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NCLP19338 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NCLP19338 IGHV3-72-202ENST00000621503 303 ntBASIC17.28■□□□□ 0.36
NCLP19338 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.28■□□□□ 0.36
NCLP19338 AC020910.6-201ENST00000623084 1459 ntBASIC17.28■□□□□ 0.36
NCLP19338 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCLP19338 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms