Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC017083.2-201ENST00000608069 979 ntBASIC14.54□□□□□ -0.08
GPC4O75487 AL358472.3-201ENST00000608147 415 ntBASIC14.54□□□□□ -0.08
GPC4O75487 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.54□□□□□ -0.08
GPC4O75487 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.54□□□□□ -0.08
GPC4O75487 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC4O75487 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.54□□□□□ -0.08
GPC4O75487 COX11-210ENST00000639671 696 ntBASIC14.54□□□□□ -0.08
GPC4O75487 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.54□□□□□ -0.08
GPC4O75487 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.54□□□□□ -0.08
GPC4O75487 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC4O75487 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
GPC4O75487 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.54□□□□□ -0.08
GPC4O75487 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC4O75487 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
GPC4O75487 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.53□□□□□ -0.08
GPC4O75487 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GPC4O75487 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.53□□□□□ -0.08
GPC4O75487 KRT8P4-201ENST00000509735 1454 ntBASIC14.53□□□□□ -0.08
GPC4O75487 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.53□□□□□ -0.08
GPC4O75487 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GPC4O75487 HLA-V-201ENST00000429037 534 ntBASIC14.53□□□□□ -0.08
GPC4O75487 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.53□□□□□ -0.08
GPC4O75487 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.53□□□□□ -0.08
GPC4O75487 IGHV3-71-201ENST00000523324 359 ntBASIC14.53□□□□□ -0.08
GPC4O75487 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.53□□□□□ -0.08
GPC4O75487 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.53□□□□□ -0.08
GPC4O75487 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.53□□□□□ -0.08
GPC4O75487 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.53□□□□□ -0.08
GPC4O75487 PPY2P-201ENST00000582808 702 ntBASIC14.53□□□□□ -0.08
GPC4O75487 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GPC4O75487 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GPC4O75487 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC4O75487 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC4O75487 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GPC4O75487 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GPC4O75487 AC090505.1-201ENST00000430515 1834 ntBASIC14.52□□□□□ -0.08
GPC4O75487 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
GPC4O75487 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GPC4O75487 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GPC4O75487 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
GPC4O75487 AL590440.2-201ENST00000641973 1595 ntBASIC14.52□□□□□ -0.08
GPC4O75487 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GPC4O75487 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC14.52□□□□□ -0.08
GPC4O75487 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GPC4O75487 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.52□□□□□ -0.08
GPC4O75487 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
GPC4O75487 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.52□□□□□ -0.08
GPC4O75487 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
GPC4O75487 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GPC4O75487 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms