Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 GPS2P2-201ENST00000430745 888 ntBASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 AC022145.2-201ENST00000598203 171 ntBASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 AC000095.1-201ENST00000603208 874 ntBASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 AC126564.1-201ENST00000623628 2013 ntBASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 KC6-207ENST00000600644 2311 ntTSL 3 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 AL359510.2-201ENST00000624958 2249 ntBASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 AL080243.2-201ENST00000418783 582 ntBASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 KRT18P32-201ENST00000424695 1287 ntBASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 MKNK2P1-201ENST00000437526 628 ntBASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 SLC25A1P1-201ENST00000528351 927 ntBASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 AC093520.2-201ENST00000561830 333 ntBASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 MIR4453-201ENST00000584019 89 ntBASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 AL589739.1-201ENST00000607720 493 ntBASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.66□□□□□ -0.38
LYSMD2Q8IV50 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LYSMD2Q8IV50 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.65□□□□□ -0.38
LYSMD2Q8IV50 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.65□□□□□ -0.38
LYSMD2Q8IV50 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms