Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
COL5A1P20908 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
COL5A1P20908 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 GGTLC4P-201ENST00000402176 664 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 AL157823.1-201ENST00000403727 628 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.43□□□□□ -0.26
COL5A1P20908 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC13.43□□□□□ -0.26
COL5A1P20908 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.43□□□□□ -0.26
COL5A1P20908 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.43□□□□□ -0.26
COL5A1P20908 AC092612.1-201ENST00000514501 998 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.43□□□□□ -0.26
COL5A1P20908 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC13.43□□□□□ -0.26
COL5A1P20908 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.43□□□□□ -0.26
COL5A1P20908 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC13.43□□□□□ -0.26
COL5A1P20908 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
COL5A1P20908 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC13.43□□□□□ -0.26
COL5A1P20908 AC090510.3-201ENST00000615831 821 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
COL5A1P20908 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC13.43□□□□□ -0.26
COL5A1P20908 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 HSPA7-201ENST00000445535 1927 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
COL5A1P20908 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
COL5A1P20908 RNA5SP491-201ENST00000362936 118 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 MIR1307-201ENST00000408840 149 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 AC103563.1-201ENST00000429316 123 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC13.43□□□□□ -0.26
COL5A1P20908 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.43□□□□□ -0.26
COL5A1P20908 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
COL5A1P20908 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC13.43□□□□□ -0.26
COL5A1P20908 HNRNPA1P16-201ENST00000575692 955 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 MIR4746-201ENST00000579802 71 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 PRMT1P1-201ENST00000604252 1009 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 AL591424.3-201ENST00000614278 872 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.43□□□□□ -0.26
COL5A1P20908 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
COL5A1P20908 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
COL5A1P20908 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL5A1P20908 AC020931.1-201ENST00000589622 1346 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC13.43□□□□□ -0.26
COL5A1P20908 AC152010.1-201ENST00000415779 2006 ntBASIC13.43□□□□□ -0.26
COL5A1P20908 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
COL5A1P20908 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
COL5A1P20908 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
COL5A1P20908 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
COL5A1P20908 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.42□□□□□ -0.26
COL5A1P20908 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL5A1P20908 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
COL5A1P20908 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL5A1P20908 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL5A1P20908 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.42□□□□□ -0.26
COL5A1P20908 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL5A1P20908 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL5A1P20908 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL5A1P20908 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL5A1P20908 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.42□□□□□ -0.26
COL5A1P20908 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL5A1P20908 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.42□□□□□ -0.26
COL5A1P20908 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.42□□□□□ -0.26
COL5A1P20908 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL5A1P20908 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC13.42□□□□□ -0.26
COL5A1P20908 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC13.42□□□□□ -0.26
COL5A1P20908 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.42□□□□□ -0.26
COL5A1P20908 AC026120.2-201ENST00000617239 309 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms