Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.96□□□□□ -0.17
CAPN3P20807 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.96□□□□□ -0.17
CAPN3P20807 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
CAPN3P20807 AC010319.3-201ENST00000597028 470 ntBASIC13.96□□□□□ -0.17
CAPN3P20807 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.96□□□□□ -0.17
CAPN3P20807 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.96□□□□□ -0.17
CAPN3P20807 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CAPN3P20807 LINC02486-201ENST00000604157 3000 ntBASIC13.96□□□□□ -0.17
CAPN3P20807 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.96□□□□□ -0.17
CAPN3P20807 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CAPN3P20807 AC083964.2-201ENST00000623988 2396 ntBASIC13.96□□□□□ -0.18
CAPN3P20807 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CAPN3P20807 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CAPN3P20807 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
CAPN3P20807 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CAPN3P20807 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CAPN3P20807 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CAPN3P20807 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CAPN3P20807 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.95□□□□□ -0.18
CAPN3P20807 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 ANKRD19P-201ENST00000338192 862 ntBASIC13.95□□□□□ -0.18
CAPN3P20807 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 POM121L8P-201ENST00000417732 1281 ntBASIC13.95□□□□□ -0.18
CAPN3P20807 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.95□□□□□ -0.18
CAPN3P20807 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 POM121L9P-203ENST00000441984 1285 ntBASIC13.95□□□□□ -0.18
CAPN3P20807 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CAPN3P20807 KRT18P25-201ENST00000508931 1278 ntBASIC13.95□□□□□ -0.18
CAPN3P20807 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.95□□□□□ -0.18
CAPN3P20807 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.95□□□□□ -0.18
CAPN3P20807 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.95□□□□□ -0.18
CAPN3P20807 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.95□□□□□ -0.18
CAPN3P20807 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.95□□□□□ -0.18
CAPN3P20807 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 AL022328.1-201ENST00000610050 478 ntBASIC13.95□□□□□ -0.18
CAPN3P20807 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CAPN3P20807 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 AC009093.2-202ENST00000620513 2079 ntBASIC13.95□□□□□ -0.18
CAPN3P20807 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.95□□□□□ -0.18
CAPN3P20807 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 KRT8P28-201ENST00000433288 1390 ntBASIC13.95□□□□□ -0.18
CAPN3P20807 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.95□□□□□ -0.18
CAPN3P20807 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CAPN3P20807 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CAPN3P20807 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CAPN3P20807 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CAPN3P20807 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CAPN3P20807 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CAPN3P20807 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CAPN3P20807 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.94□□□□□ -0.18
CAPN3P20807 MIR497HG-202ENST00000572453 3838 ntBASIC13.94□□□□□ -0.18
CAPN3P20807 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.94□□□□□ -0.18
CAPN3P20807 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CAPN3P20807 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CAPN3P20807 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CAPN3P20807 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CAPN3P20807 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.94□□□□□ -0.18
CAPN3P20807 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CAPN3P20807 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CAPN3P20807 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms