Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.15□□□□□ -0.46
CD74P04233 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.15□□□□□ -0.46
CD74P04233 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.15□□□□□ -0.46
CD74P04233 AC140878.1-201ENST00000565277 250 ntBASIC12.15□□□□□ -0.46
CD74P04233 AC009407.1-201ENST00000568958 598 ntBASIC12.15□□□□□ -0.46
CD74P04233 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.15□□□□□ -0.46
CD74P04233 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.15□□□□□ -0.46
CD74P04233 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.15□□□□□ -0.46
CD74P04233 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.15□□□□□ -0.46
CD74P04233 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.15□□□□□ -0.46
CD74P04233 AC106818.1-201ENST00000623223 3242 ntBASIC12.15□□□□□ -0.46
CD74P04233 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.15□□□□□ -0.46
CD74P04233 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.15□□□□□ -0.46
CD74P04233 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CD74P04233 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CD74P04233 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CD74P04233 PCDHA6-201ENST00000378126 3267 ntBASIC12.15□□□□□ -0.46
CD74P04233 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CD74P04233 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
CD74P04233 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CD74P04233 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.15□□□□□ -0.47
CD74P04233 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CD74P04233 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CD74P04233 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 CLUHP2-201ENST00000426660 1303 ntBASIC12.14□□□□□ -0.47
CD74P04233 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CD74P04233 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 AC004899.2-201ENST00000622993 3860 ntBASIC12.14□□□□□ -0.47
CD74P04233 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
CD74P04233 AC131212.3-201ENST00000624087 4219 ntBASIC12.14□□□□□ -0.47
CD74P04233 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
CD74P04233 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.14□□□□□ -0.47
CD74P04233 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
CD74P04233 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.14□□□□□ -0.47
CD74P04233 RRP7BP-205ENST00000566851 833 ntBASIC12.14□□□□□ -0.47
CD74P04233 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.14□□□□□ -0.47
CD74P04233 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.14□□□□□ -0.47
CD74P04233 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.14□□□□□ -0.47
CD74P04233 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.14□□□□□ -0.47
CD74P04233 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.14□□□□□ -0.47
CD74P04233 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.14□□□□□ -0.47
CD74P04233 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CD74P04233 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD74P04233 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.14□□□□□ -0.47
CD74P04233 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 PI4KAP2-201ENST00000360806 2080 ntBASIC12.14□□□□□ -0.47
CD74P04233 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CD74P04233 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CD74P04233 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.13□□□□□ -0.47
CD74P04233 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD74P04233 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CD74P04233 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms