Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFP01375 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFP01375 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFP01375 AC090505.1-201ENST00000430515 1834 ntBASIC14.01□□□□□ -0.17
TNFP01375 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFP01375 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TNFP01375 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TNFP01375 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.01□□□□□ -0.17
TNFP01375 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 LINC01815-202ENST00000641468 1409 ntBASIC14.01□□□□□ -0.17
TNFP01375 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TNFP01375 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TNFP01375 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TNFP01375 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFP01375 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFP01375 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.01□□□□□ -0.17
TNFP01375 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 Z69890.1-201ENST00000382990 339 ntBASIC14.01□□□□□ -0.17
TNFP01375 MIR645-201ENST00000385283 94 ntBASIC14.01□□□□□ -0.17
TNFP01375 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.01□□□□□ -0.17
TNFP01375 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFP01375 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 ORAOV1P1-201ENST00000503108 395 ntBASIC14.01□□□□□ -0.17
TNFP01375 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TNFP01375 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFP01375 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 AL512310.5-201ENST00000551999 515 ntBASIC14.01□□□□□ -0.17
TNFP01375 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.01□□□□□ -0.17
TNFP01375 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TNFP01375 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TNFP01375 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TNFP01375 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFP01375 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFP01375 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TNFP01375 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFP01375 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFP01375 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
TNFP01375 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14□□□□□ -0.17
TNFP01375 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14□□□□□ -0.17
TNFP01375 CICP24-201ENST00000605464 2705 ntBASIC14□□□□□ -0.17
TNFP01375 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14□□□□□ -0.17
TNFP01375 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14□□□□□ -0.17
TNFP01375 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
TNFP01375 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14□□□□□ -0.17
TNFP01375 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TNFP01375 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14□□□□□ -0.17
TNFP01375 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14□□□□□ -0.17
TNFP01375 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14□□□□□ -0.17
TNFP01375 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14□□□□□ -0.17
TNFP01375 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14□□□□□ -0.17
TNFP01375 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TNFP01375 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14□□□□□ -0.17
TNFP01375 U62317.3-201ENST00000608319 855 ntBASIC14□□□□□ -0.17
TNFP01375 AC007881.3-201ENST00000608897 607 ntBASIC14□□□□□ -0.17
TNFP01375 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14□□□□□ -0.17
TNFP01375 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 AP001184.1-201ENST00000637936 376 ntBASIC14□□□□□ -0.17
TNFP01375 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14□□□□□ -0.17
TNFP01375 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14□□□□□ -0.17
TNFP01375 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14□□□□□ -0.17
TNFP01375 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14□□□□□ -0.17
TNFP01375 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TNFP01375 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFP01375 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms