Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ANKRD26P3-201ENST00000454044 2748 ntBASIC20.87■□□□□ 0.93
HFM1A2PYH4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 AL357563.1-201ENST00000404728 395 ntBASIC20.87■□□□□ 0.93
HFM1A2PYH4 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 PRSS3P1-201ENST00000503996 742 ntBASIC20.87■□□□□ 0.93
HFM1A2PYH4 CR383656.3-201ENST00000551315 183 ntBASIC20.87■□□□□ 0.93
HFM1A2PYH4 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 RN7SL470P-201ENST00000583069 259 ntBASIC20.87■□□□□ 0.93
HFM1A2PYH4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HFM1A2PYH4 HLA-C-210ENST00000640219 976 ntBASIC20.87■□□□□ 0.93
HFM1A2PYH4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HFM1A2PYH4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HFM1A2PYH4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HFM1A2PYH4 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC20.86■□□□□ 0.93
HFM1A2PYH4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HFM1A2PYH4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HFM1A2PYH4 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC20.86■□□□□ 0.93
HFM1A2PYH4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HFM1A2PYH4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HFM1A2PYH4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HFM1A2PYH4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HFM1A2PYH4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HFM1A2PYH4 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HFM1A2PYH4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC20.86■□□□□ 0.93
HFM1A2PYH4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HFM1A2PYH4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HFM1A2PYH4 AC089987.1-201ENST00000551654 2209 ntBASIC20.86■□□□□ 0.93
HFM1A2PYH4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HFM1A2PYH4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
HFM1A2PYH4 AC073210.1-201ENST00000414799 232 ntBASIC20.86■□□□□ 0.93
HFM1A2PYH4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC20.86■□□□□ 0.93
HFM1A2PYH4 AC079112.1-201ENST00000454972 939 ntBASIC20.86■□□□□ 0.93
HFM1A2PYH4 STK24P1-201ENST00000455035 1291 ntBASIC20.86■□□□□ 0.93
HFM1A2PYH4 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC20.86■□□□□ 0.93
HFM1A2PYH4 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HFM1A2PYH4 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC20.86■□□□□ 0.93
HFM1A2PYH4 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HFM1A2PYH4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HFM1A2PYH4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 AC025183.3-201ENST00000623526 1482 ntBASIC20.85■□□□□ 0.93
HFM1A2PYH4 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 AC006529.1-201ENST00000459978 637 ntBASIC20.85■□□□□ 0.93
HFM1A2PYH4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 KRT18P8-201ENST00000581937 1246 ntBASIC20.85■□□□□ 0.93
HFM1A2PYH4 GAS7-216ENST00000583882 553 ntTSL 5 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 HELLS-212ENST00000630929 400 ntTSL 5 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC20.85■□□□□ 0.93
HFM1A2PYH4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms