Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 LGALS14-201ENST00000360675 773 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AL139094.1-201ENST00000405549 1188 ntBASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 MTCO3P42-201ENST00000509488 518 ntBASIC13.95□□□□□ -0.18
LHX6Q9UPM6 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 MTCO3P39-201ENST00000514812 518 ntBASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 Z93930.3-201ENST00000607919 749 ntBASIC13.95□□□□□ -0.18
LHX6Q9UPM6 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 MIR6769A-201ENST00000617340 73 ntBASIC13.95□□□□□ -0.18
LHX6Q9UPM6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AL451007.2-201ENST00000632004 563 ntBASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LHX6Q9UPM6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 KRT8P21-201ENST00000430398 1491 ntBASIC13.94□□□□□ -0.18
LHX6Q9UPM6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AL589826.1-201ENST00000340697 249 ntBASIC13.94□□□□□ -0.18
LHX6Q9UPM6 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 INSL6-201ENST00000381641 758 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AL365338.1-201ENST00000422282 858 ntBASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 LLPH-202ENST00000446587 1177 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AL137802.2-201ENST00000562878 1110 ntBASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AC093752.3-201ENST00000567343 901 ntBASIC13.94□□□□□ -0.18
LHX6Q9UPM6 MTND4LP25-201ENST00000570218 163 ntBASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AC006548.2-201ENST00000605217 529 ntBASIC13.94□□□□□ -0.18
LHX6Q9UPM6 LINC01783-202ENST00000614408 828 ntBASIC13.94□□□□□ -0.18
LHX6Q9UPM6 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LHX6Q9UPM6 BX284668.2-205ENST00000619677 828 ntBASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AP003072.3-201ENST00000623456 594 ntBASIC13.94□□□□□ -0.18
LHX6Q9UPM6 AC025262.2-201ENST00000623975 1056 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms