Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.76□□□□□ -0.37
SEC61A1P61619 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC61A1P61619 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 KLF2P4-201ENST00000451959 1225 ntBASIC12.76□□□□□ -0.37
SEC61A1P61619 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.76□□□□□ -0.37
SEC61A1P61619 BNIP3P42-201ENST00000454982 569 ntBASIC12.76□□□□□ -0.37
SEC61A1P61619 AC007551.1-201ENST00000457394 519 ntBASIC12.76□□□□□ -0.37
SEC61A1P61619 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.76□□□□□ -0.37
SEC61A1P61619 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 BNIP3P29-201ENST00000598302 571 ntBASIC12.76□□□□□ -0.37
SEC61A1P61619 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.76□□□□□ -0.37
SEC61A1P61619 AP005019.2-201ENST00000615104 511 ntBASIC12.76□□□□□ -0.37
SEC61A1P61619 AC011447.5-201ENST00000616168 564 ntBASIC12.76□□□□□ -0.37
SEC61A1P61619 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC61A1P61619 AC093525.8-201ENST00000624099 1342 ntBASIC12.76□□□□□ -0.37
SEC61A1P61619 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SEC61A1P61619 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC61A1P61619 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC61A1P61619 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC61A1P61619 AC092053.3-201ENST00000641308 4975 ntBASIC12.76□□□□□ -0.37
SEC61A1P61619 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SEC61A1P61619 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC61A1P61619 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC61A1P61619 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SEC61A1P61619 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SEC61A1P61619 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
SEC61A1P61619 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SEC61A1P61619 ACKR1-201ENST00000368121 1240 ntBASIC12.75□□□□□ -0.37
SEC61A1P61619 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC61A1P61619 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.75□□□□□ -0.37
SEC61A1P61619 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.75□□□□□ -0.37
SEC61A1P61619 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC61A1P61619 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.75□□□□□ -0.37
SEC61A1P61619 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
SEC61A1P61619 RPS2P32-201ENST00000439199 892 ntBASIC12.75□□□□□ -0.37
SEC61A1P61619 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC61A1P61619 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.75□□□□□ -0.37
SEC61A1P61619 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.75□□□□□ -0.37
SEC61A1P61619 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.75□□□□□ -0.37
SEC61A1P61619 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.75□□□□□ -0.37
SEC61A1P61619 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SEC61A1P61619 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.75□□□□□ -0.37
SEC61A1P61619 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC61A1P61619 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.75□□□□□ -0.37
SEC61A1P61619 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 AP005482.1-201ENST00000563722 1273 ntBASIC12.75□□□□□ -0.37
SEC61A1P61619 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC61A1P61619 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.75□□□□□ -0.37
SEC61A1P61619 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC61A1P61619 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.75□□□□□ -0.37
SEC61A1P61619 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SEC61A1P61619 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.75□□□□□ -0.37
SEC61A1P61619 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC61A1P61619 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SEC61A1P61619 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.75□□□□□ -0.37
SEC61A1P61619 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.75□□□□□ -0.37
SEC61A1P61619 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.75□□□□□ -0.37
SEC61A1P61619 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC61A1P61619 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.75□□□□□ -0.37
SEC61A1P61619 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SEC61A1P61619 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms