Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRPF1P55201 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.31■□□□□ 0.52
BRPF1P55201 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC18.31■□□□□ 0.52
BRPF1P55201 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
BRPF1P55201 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
BRPF1P55201 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
BRPF1P55201 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.3■□□□□ 0.52
BRPF1P55201 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BRPF1P55201 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BRPF1P55201 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
BRPF1P55201 TUBBP5-203ENST00000508529 1334 ntBASIC18.3■□□□□ 0.52
BRPF1P55201 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
BRPF1P55201 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
BRPF1P55201 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BRPF1P55201 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC18.3■□□□□ 0.52
BRPF1P55201 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 RN7SKP214-201ENST00000364208 315 ntBASIC18.3■□□□□ 0.52
BRPF1P55201 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.3■□□□□ 0.52
BRPF1P55201 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.3■□□□□ 0.52
BRPF1P55201 TSPY25P-201ENST00000429463 745 ntBASIC18.3■□□□□ 0.52
BRPF1P55201 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC18.3■□□□□ 0.52
BRPF1P55201 Z97180.1-201ENST00000445173 988 ntBASIC18.3■□□□□ 0.52
BRPF1P55201 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 RCC2P8-201ENST00000502779 1035 ntBASIC18.3■□□□□ 0.52
BRPF1P55201 AC116345.2-201ENST00000512837 523 ntBASIC18.3■□□□□ 0.52
BRPF1P55201 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.3■□□□□ 0.52
BRPF1P55201 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC18.3■□□□□ 0.52
BRPF1P55201 MIR3147-201ENST00000577811 66 ntBASIC18.3■□□□□ 0.52
BRPF1P55201 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
BRPF1P55201 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.3■□□□□ 0.52
BRPF1P55201 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 LINC01165-201ENST00000445190 1623 ntBASIC18.3■□□□□ 0.52
BRPF1P55201 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
BRPF1P55201 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC18.3■□□□□ 0.52
BRPF1P55201 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRPF1P55201 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.3■□□□□ 0.52
BRPF1P55201 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC18.29■□□□□ 0.52
BRPF1P55201 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC18.29■□□□□ 0.52
BRPF1P55201 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC18.29■□□□□ 0.52
BRPF1P55201 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.29■□□□□ 0.52
BRPF1P55201 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.29■□□□□ 0.52
BRPF1P55201 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
BRPF1P55201 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC18.29■□□□□ 0.52
BRPF1P55201 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.29■□□□□ 0.52
BRPF1P55201 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.29■□□□□ 0.52
BRPF1P55201 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.29■□□□□ 0.52
BRPF1P55201 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.29■□□□□ 0.52
BRPF1P55201 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.29■□□□□ 0.52
BRPF1P55201 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.29■□□□□ 0.52
BRPF1P55201 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.29■□□□□ 0.52
BRPF1P55201 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
BRPF1P55201 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.29■□□□□ 0.52
BRPF1P55201 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
BRPF1P55201 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
BRPF1P55201 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.29■□□□□ 0.52
BRPF1P55201 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.29■□□□□ 0.52
BRPF1P55201 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRPF1P55201 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.29■□□□□ 0.52
BRPF1P55201 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRPF1P55201 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRPF1P55201 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRPF1P55201 AC023794.5-201ENST00000564380 2157 ntBASIC18.28■□□□□ 0.52
BRPF1P55201 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms