Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.98□□□□□ -0.17
CAPN3P20807 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.98□□□□□ -0.17
CAPN3P20807 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.98□□□□□ -0.17
CAPN3P20807 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.98□□□□□ -0.17
CAPN3P20807 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.98□□□□□ -0.17
CAPN3P20807 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.98□□□□□ -0.17
CAPN3P20807 RN7SL190P-201ENST00000582519 257 ntBASIC13.98□□□□□ -0.17
CAPN3P20807 AC233724.13-201ENST00000598383 410 ntBASIC13.98□□□□□ -0.17
CAPN3P20807 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.98□□□□□ -0.17
CAPN3P20807 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CAPN3P20807 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CAPN3P20807 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CAPN3P20807 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.98□□□□□ -0.17
CAPN3P20807 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.98□□□□□ -0.17
CAPN3P20807 AL022313.4-201ENST00000562756 2046 ntBASIC13.98□□□□□ -0.17
CAPN3P20807 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CAPN3P20807 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CAPN3P20807 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CAPN3P20807 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CAPN3P20807 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CAPN3P20807 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CAPN3P20807 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.97□□□□□ -0.17
CAPN3P20807 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.97□□□□□ -0.17
CAPN3P20807 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 AC064801.2-201ENST00000625052 1303 ntBASIC13.97□□□□□ -0.17
CAPN3P20807 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CAPN3P20807 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CAPN3P20807 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.97□□□□□ -0.17
CAPN3P20807 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.97□□□□□ -0.17
CAPN3P20807 CROCCP4-201ENST00000457096 498 ntBASIC13.97□□□□□ -0.17
CAPN3P20807 MESTP3-201ENST00000503460 968 ntBASIC13.97□□□□□ -0.17
CAPN3P20807 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.97□□□□□ -0.17
CAPN3P20807 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.97□□□□□ -0.17
CAPN3P20807 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.97□□□□□ -0.17
CAPN3P20807 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.97□□□□□ -0.17
CAPN3P20807 CLUHP6-201ENST00000580789 941 ntBASIC13.97□□□□□ -0.17
CAPN3P20807 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.97□□□□□ -0.17
CAPN3P20807 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CAPN3P20807 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.97□□□□□ -0.17
CAPN3P20807 BX088702.1-201ENST00000610784 235 ntBASIC13.97□□□□□ -0.17
CAPN3P20807 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.97□□□□□ -0.17
CAPN3P20807 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CAPN3P20807 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 AC126335.2-201ENST00000623362 4637 ntBASIC13.97□□□□□ -0.17
CAPN3P20807 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CAPN3P20807 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.97□□□□□ -0.17
CAPN3P20807 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CAPN3P20807 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CAPN3P20807 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.97□□□□□ -0.17
CAPN3P20807 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CAPN3P20807 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.97□□□□□ -0.17
CAPN3P20807 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.97□□□□□ -0.17
CAPN3P20807 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CAPN3P20807 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CAPN3P20807 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CAPN3P20807 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
CAPN3P20807 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.96□□□□□ -0.17
CAPN3P20807 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CAPN3P20807 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CAPN3P20807 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CAPN3P20807 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CAPN3P20807 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CAPN3P20807 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CAPN3P20807 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CAPN3P20807 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.96□□□□□ -0.17
CAPN3P20807 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CAPN3P20807 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CAPN3P20807 CTBP2P5-201ENST00000454986 1264 ntBASIC13.96□□□□□ -0.17
CAPN3P20807 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CAPN3P20807 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.96□□□□□ -0.17
CAPN3P20807 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.96□□□□□ -0.17
CAPN3P20807 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CAPN3P20807 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms