Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 TEKT4P2-202ENST00000559466 1312 ntBASIC15.9■□□□□ 0.14
UBE2OQ9C0C9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
UBE2OQ9C0C9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBE2OQ9C0C9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBE2OQ9C0C9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBE2OQ9C0C9 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 BCL2L12P1-201ENST00000508390 733 ntBASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 AC068831.5-201ENST00000557387 328 ntBASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 AC025183.3-201ENST00000623526 1482 ntBASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 C18orf15-201ENST00000623680 2534 ntBASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 AC126365.1-201ENST00000578585 1514 ntBASIC15.89■□□□□ 0.13
UBE2OQ9C0C9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 RPL3P5-201ENST00000441645 1232 ntBASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 CASP3-205ENST00000517513 964 ntTSL 5 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 RN7SL121P-201ENST00000584223 273 ntBASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 BX088702.1-201ENST00000610784 235 ntBASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
UBE2OQ9C0C9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBE2OQ9C0C9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBE2OQ9C0C9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBE2OQ9C0C9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.87■□□□□ 0.13
UBE2OQ9C0C9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBE2OQ9C0C9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
UBE2OQ9C0C9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBE2OQ9C0C9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.87■□□□□ 0.13
UBE2OQ9C0C9 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms