Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 HLA-K-203ENST00000430151 1046 ntBASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 FAM86LP-201ENST00000478302 853 ntBASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 AC000095.1-201ENST00000603208 874 ntBASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM55Q9BYV6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.71□□□□□ -0.06
TRIM55Q9BYV6 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM55Q9BYV6 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM55Q9BYV6 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.71□□□□□ -0.06
TRIM55Q9BYV6 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
TRIM55Q9BYV6 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 KRT8P14-201ENST00000414254 1442 ntBASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 KLF2P4-201ENST00000451959 1225 ntBASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 FAM8A2P-201ENST00000528813 1142 ntBASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 MIR6074-201ENST00000612054 107 ntBASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM55Q9BYV6 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms