Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 RN7SKP214-201ENST00000364208 315 ntBASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 CYP46A4P-201ENST00000414953 267 ntBASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 SPTLC1P5-201ENST00000450718 252 ntBASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 AC090857.1-201ENST00000527400 390 ntBASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 AL157791.1-201ENST00000553667 1699 ntBASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 KHSRPP1-201ENST00000427983 1768 ntBASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP3Q9BWW4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 TMBIM7P-202ENST00000641474 1516 ntBASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 AC006504.5-208ENST00000588784 2401 ntBASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 AL662890.1-201ENST00000396818 632 ntBASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 AC078875.1-201ENST00000431907 724 ntBASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 AL133466.1-201ENST00000447582 150 ntBASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms