Protein–RNA interactions for Protein: Q96EX2

RNFT2, RING finger and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT2Q96EX2 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 AP006288.1-201ENST00000446065 395 ntBASIC13.18□□□□□ -0.3
RNFT2Q96EX2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 AC025678.2-201ENST00000562061 970 ntBASIC13.18□□□□□ -0.3
RNFT2Q96EX2 AC120045.2-201ENST00000567334 178 ntBASIC13.18□□□□□ -0.3
RNFT2Q96EX2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 INTS4P2-202ENST00000614726 2019 ntBASIC13.18□□□□□ -0.3
RNFT2Q96EX2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.18□□□□□ -0.3
RNFT2Q96EX2 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 AC241585.1-201ENST00000433527 519 ntBASIC13.17□□□□□ -0.3
RNFT2Q96EX2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 AC004449.1-201ENST00000564240 433 ntBASIC13.17□□□□□ -0.3
RNFT2Q96EX2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 BRI3BPP1-201ENST00000594224 787 ntBASIC13.17□□□□□ -0.3
RNFT2Q96EX2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 AC004466.1-201ENST00000599515 1080 ntBASIC13.17□□□□□ -0.3
RNFT2Q96EX2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 NCLP1-201ENST00000445357 1963 ntBASIC13.17□□□□□ -0.3
RNFT2Q96EX2 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNFT2Q96EX2 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms