Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 DUX4L45-201ENST00000566406 1057 ntBASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 MIR6775-201ENST00000617557 69 ntBASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 E2F3P2-201ENST00000447755 1422 ntBASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 ANKRD19P-201ENST00000338192 862 ntBASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 PGF-202ENST00000405431 666 ntTSL 5 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 HLA-V-201ENST00000429037 534 ntBASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 AL157407.1-201ENST00000435784 904 ntBASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 YBX1P6-201ENST00000442962 1002 ntBASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 AC009955.4-201ENST00000597192 544 ntBASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 MIR6720-201ENST00000611664 98 ntBASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 AC131212.3-201ENST00000624087 4219 ntBASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 AL928921.2-201ENST00000641325 2442 ntBASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
TTC9CQ8N5M4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms