Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 MIR1307-201ENST00000408840 149 ntBASIC17.77■□□□□ 0.44
RC3H1Q5TC82 RPSAP12-201ENST00000435879 888 ntBASIC17.77■□□□□ 0.44
RC3H1Q5TC82 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 BRI3P1-201ENST00000440440 378 ntBASIC17.77■□□□□ 0.44
RC3H1Q5TC82 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 RN7SL351P-201ENST00000469306 248 ntBASIC17.77■□□□□ 0.44
RC3H1Q5TC82 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 AC004801.1-201ENST00000549557 360 ntBASIC17.77■□□□□ 0.44
RC3H1Q5TC82 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 FBXO36P1-201ENST00000579006 471 ntBASIC17.77■□□□□ 0.44
RC3H1Q5TC82 MIR6816-201ENST00000620368 66 ntBASIC17.77■□□□□ 0.44
RC3H1Q5TC82 GARS-210ENST00000627489 324 ntTSL 4 BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RC3H1Q5TC82 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RC3H1Q5TC82 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RC3H1Q5TC82 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RC3H1Q5TC82 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RC3H1Q5TC82 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.77■□□□□ 0.43
RC3H1Q5TC82 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RC3H1Q5TC82 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RC3H1Q5TC82 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC17.77■□□□□ 0.43
RC3H1Q5TC82 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
RC3H1Q5TC82 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.77■□□□□ 0.43
RC3H1Q5TC82 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RC3H1Q5TC82 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.77■□□□□ 0.43
RC3H1Q5TC82 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 AC020931.1-201ENST00000589622 1346 ntBASIC17.76■□□□□ 0.43
RC3H1Q5TC82 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 AL022313.4-201ENST00000562756 2046 ntBASIC17.76■□□□□ 0.43
RC3H1Q5TC82 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 HNRNPA1P21-201ENST00000424115 961 ntBASIC17.76■□□□□ 0.43
RC3H1Q5TC82 IFNWP2-201ENST00000431203 580 ntBASIC17.76■□□□□ 0.43
RC3H1Q5TC82 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 RN7SL605P-201ENST00000577229 281 ntBASIC17.76■□□□□ 0.43
RC3H1Q5TC82 GGNBP1-204ENST00000613113 887 ntBASIC17.76■□□□□ 0.43
RC3H1Q5TC82 PTPN20CP-201ENST00000614090 920 ntBASIC17.76■□□□□ 0.43
RC3H1Q5TC82 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RC3H1Q5TC82 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 AL139158.3-201ENST00000641212 1562 ntBASIC17.75■□□□□ 0.43
RC3H1Q5TC82 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 HLA-DMA-202ENST00000395303 1007 ntBASIC17.75■□□□□ 0.43
RC3H1Q5TC82 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 CDCA4P4-201ENST00000435216 680 ntBASIC17.75■□□□□ 0.43
RC3H1Q5TC82 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 TPT1P11-201ENST00000458482 498 ntBASIC17.75■□□□□ 0.43
RC3H1Q5TC82 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 MIR8071-1-201ENST00000616769 65 ntBASIC17.75■□□□□ 0.43
RC3H1Q5TC82 MIR8071-2-201ENST00000616772 65 ntBASIC17.75■□□□□ 0.43
RC3H1Q5TC82 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 RN7SL832P-201ENST00000607781 1756 ntBASIC17.75■□□□□ 0.43
RC3H1Q5TC82 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RC3H1Q5TC82 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms