Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.63□□□□□ -0.07
TRIM38O00635 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM38O00635 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRIM38O00635 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM38O00635 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM38O00635 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM38O00635 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.63□□□□□ -0.07
TRIM38O00635 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRIM38O00635 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM38O00635 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 AC009093.2-202ENST00000620513 2079 ntBASIC14.62□□□□□ -0.07
TRIM38O00635 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRIM38O00635 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM38O00635 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRIM38O00635 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 AC107918.4-201ENST00000641966 3141 ntBASIC14.62□□□□□ -0.07
TRIM38O00635 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM38O00635 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM38O00635 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRIM38O00635 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 RN7SKP175-201ENST00000408472 289 ntBASIC14.62□□□□□ -0.07
TRIM38O00635 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM38O00635 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM38O00635 TUBB8P8-201ENST00000458717 1058 ntBASIC14.62□□□□□ -0.07
TRIM38O00635 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.62□□□□□ -0.07
TRIM38O00635 AC024681.1-201ENST00000521917 487 ntBASIC14.62□□□□□ -0.07
TRIM38O00635 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.62□□□□□ -0.07
TRIM38O00635 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM38O00635 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.62□□□□□ -0.07
TRIM38O00635 MIR4722-201ENST00000578292 60 ntBASIC14.62□□□□□ -0.07
TRIM38O00635 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.62□□□□□ -0.07
TRIM38O00635 AC009955.4-201ENST00000597192 544 ntBASIC14.62□□□□□ -0.07
TRIM38O00635 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
TRIM38O00635 AL137783.1-201ENST00000623494 1896 ntBASIC14.62□□□□□ -0.07
TRIM38O00635 AC100757.4-201ENST00000626934 759 ntBASIC14.62□□□□□ -0.07
TRIM38O00635 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM38O00635 AC002472.3-201ENST00000640124 621 ntBASIC14.62□□□□□ -0.07
TRIM38O00635 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM38O00635 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
TRIM38O00635 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM38O00635 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM38O00635 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM38O00635 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
TRIM38O00635 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM38O00635 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
TRIM38O00635 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM38O00635 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM38O00635 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM38O00635 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRIM38O00635 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM38O00635 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRIM38O00635 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM38O00635 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM38O00635 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM38O00635 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM38O00635 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRIM38O00635 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM38O00635 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM38O00635 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TRIM38O00635 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRIM38O00635 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRIM38O00635 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM38O00635 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRIM38O00635 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM38O00635 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TRIM38O00635 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM38O00635 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM38O00635 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM38O00635 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRIM38O00635 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM38O00635 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM38O00635 AC012618.1-201ENST00000461223 412 ntBASIC14.61□□□□□ -0.07
TRIM38O00635 NUP210P1-202ENST00000504322 710 ntBASIC14.61□□□□□ -0.07
TRIM38O00635 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.61□□□□□ -0.07
TRIM38O00635 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRIM38O00635 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.61□□□□□ -0.07
TRIM38O00635 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM38O00635 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM38O00635 AC100827.2-201ENST00000563214 1194 ntBASIC14.61□□□□□ -0.07
TRIM38O00635 MIR3907-201ENST00000579424 151 ntBASIC14.61□□□□□ -0.07
TRIM38O00635 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM38O00635 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.61□□□□□ -0.07
TRIM38O00635 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM38O00635 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms