Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.72□□□□□ -0.05
HLA-CQ95604 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HLA-CQ95604 AD000864.1-201ENST00000624076 2295 ntBASIC14.72□□□□□ -0.05
HLA-CQ95604 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HLA-CQ95604 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-CQ95604 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-CQ95604 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
HLA-CQ95604 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-CQ95604 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
HLA-CQ95604 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-CQ95604 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HLA-CQ95604 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-CQ95604 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-CQ95604 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-CQ95604 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-CQ95604 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-CQ95604 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-CQ95604 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-CQ95604 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC14.71□□□□□ -0.05
HLA-CQ95604 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-CQ95604 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-CQ95604 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-CQ95604 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-CQ95604 ASS1P1-201ENST00000402854 1237 ntBASIC14.71□□□□□ -0.05
HLA-CQ95604 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-CQ95604 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-CQ95604 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-CQ95604 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-CQ95604 HNRNPA3P6-201ENST00000472163 1006 ntBASIC14.71□□□□□ -0.05
HLA-CQ95604 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC14.71□□□□□ -0.05
HLA-CQ95604 AP001462.1-201ENST00000594089 452 ntBASIC14.71□□□□□ -0.05
HLA-CQ95604 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-CQ95604 OR3A1-202ENST00000615105 966 ntBASIC14.71□□□□□ -0.05
HLA-CQ95604 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
HLA-CQ95604 AC027348.2-201ENST00000624375 642 ntBASIC14.71□□□□□ -0.05
HLA-CQ95604 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-CQ95604 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
HLA-CQ95604 BX322534.1-201ENST00000635574 241 ntBASIC14.71□□□□□ -0.05
HLA-CQ95604 AC215524.1-201ENST00000635696 241 ntBASIC14.71□□□□□ -0.05
HLA-CQ95604 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-CQ95604 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HLA-CQ95604 AC117503.4-201ENST00000623229 1418 ntBASIC14.71□□□□□ -0.05
HLA-CQ95604 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-CQ95604 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-CQ95604 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-CQ95604 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
HLA-CQ95604 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.71□□□□□ -0.06
HLA-CQ95604 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-CQ95604 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.71□□□□□ -0.06
HLA-CQ95604 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
HLA-CQ95604 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
HLA-CQ95604 AC023024.2-201ENST00000623561 1993 ntBASIC14.71□□□□□ -0.06
HLA-CQ95604 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
HLA-CQ95604 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.71□□□□□ -0.06
HLA-CQ95604 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-CQ95604 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 AL137077.2-201ENST00000635124 1608 ntBASIC14.7□□□□□ -0.06
HLA-CQ95604 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-CQ95604 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
HLA-CQ95604 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-CQ95604 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 RPL3P2-204ENST00000413027 1203 ntBASIC14.7□□□□□ -0.06
HLA-CQ95604 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC14.7□□□□□ -0.06
HLA-CQ95604 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC14.7□□□□□ -0.06
HLA-CQ95604 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HLA-CQ95604 GRAMD4P6-201ENST00000556999 244 ntBASIC14.7□□□□□ -0.06
HLA-CQ95604 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.7□□□□□ -0.06
HLA-CQ95604 ABCC6P1-203ENST00000565566 1170 ntBASIC14.7□□□□□ -0.06
HLA-CQ95604 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HLA-CQ95604 AC132825.4-202ENST00000578792 434 ntBASIC14.7□□□□□ -0.06
HLA-CQ95604 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HLA-CQ95604 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-CQ95604 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-CQ95604 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-CQ95604 NF1P11-201ENST00000621292 1282 ntBASIC14.7□□□□□ -0.06
HLA-CQ95604 AC026336.4-201ENST00000624565 1050 ntBASIC14.7□□□□□ -0.06
HLA-CQ95604 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-CQ95604 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HLA-CQ95604 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HLA-CQ95604 CCT8L1P-201ENST00000465400 1674 ntBASIC14.7□□□□□ -0.06
HLA-CQ95604 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-CQ95604 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
HLA-CQ95604 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms