Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 AC090643.2-201ENST00000623442 2029 ntBASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00346Q8IVM7 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 AL136309.1-201ENST00000403917 691 ntBASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 KRT43P-201ENST00000434019 910 ntBASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 KRT17P7-201ENST00000451704 1104 ntBASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 PPY2P-201ENST00000582808 702 ntBASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 AC027601.3-201ENST00000622907 509 ntBASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 AC009093.10-201ENST00000641956 1442 ntBASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00346Q8IVM7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00346Q8IVM7 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms