Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 MIR497HG-202ENST00000572453 3838 ntBASIC12.97□□□□□ -0.33
LRRC28Q86X40 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 AL162274.1-201ENST00000617191 1098 ntBASIC12.97□□□□□ -0.33
LRRC28Q86X40 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 AC072061.1-201ENST00000569710 2234 ntBASIC12.97□□□□□ -0.33
LRRC28Q86X40 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 ACKR1-201ENST00000368121 1240 ntBASIC12.96□□□□□ -0.33
LRRC28Q86X40 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 GK-202ENST00000378941 458 ntTSL 3 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 AP001063.1-201ENST00000568332 529 ntBASIC12.96□□□□□ -0.33
LRRC28Q86X40 AC009486.1-201ENST00000569860 813 ntBASIC12.96□□□□□ -0.33
LRRC28Q86X40 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 AC107373.2-201ENST00000607735 490 ntBASIC12.96□□□□□ -0.33
LRRC28Q86X40 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LRRC28Q86X40 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRC28Q86X40 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
LRRC28Q86X40 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.96□□□□□ -0.34
LRRC28Q86X40 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.96□□□□□ -0.34
LRRC28Q86X40 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 AL137783.1-201ENST00000623494 1896 ntBASIC12.95□□□□□ -0.34
LRRC28Q86X40 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms