Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO4Q2I0M5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AL050341.2-201ENST00000567508 1541 ntBASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AL365181.1-201ENST00000564032 1828 ntBASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 KRT19P4-201ENST00000443208 943 ntBASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 TREX1-203ENST00000456089 629 ntTSL 3 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AC025594.1-201ENST00000469533 543 ntBASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AC092910.2-201ENST00000491262 348 ntBASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 URAHP-205ENST00000610227 398 ntBASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AP006248.1-201ENST00000610471 67 ntBASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AL591424.3-201ENST00000614278 872 ntBASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AC245369.7-201ENST00000631386 350 ntBASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AC005865.2-202ENST00000635814 725 ntBASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
RSPO4Q2I0M5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 AC138761.6-201ENST00000583997 1423 ntBASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 MIR339-201ENST00000362153 94 ntBASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 SAP18P2-201ENST00000434334 459 ntBASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 AC006328.1-201ENST00000437571 379 ntBASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 TMA16-204ENST00000508268 608 ntTSL 2 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 AC016582.2-202ENST00000587765 1094 ntBASIC13.85□□□□□ -0.19
RSPO4Q2I0M5 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms