Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC9.95□□□□□ -0.82
PRKDCP78527 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC9.95□□□□□ -0.82
PRKDCP78527 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC9.95□□□□□ -0.82
PRKDCP78527 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC9.95□□□□□ -0.82
PRKDCP78527 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
PRKDCP78527 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC9.95□□□□□ -0.82
PRKDCP78527 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
PRKDCP78527 AC145285.1-201ENST00000469929 694 ntBASIC9.95□□□□□ -0.82
PRKDCP78527 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
PRKDCP78527 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC9.95□□□□□ -0.82
PRKDCP78527 TPI1P2-201ENST00000491343 752 ntBASIC9.95□□□□□ -0.82
PRKDCP78527 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC9.95□□□□□ -0.82
PRKDCP78527 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC9.95□□□□□ -0.82
PRKDCP78527 CYP4F10P-201ENST00000589560 752 ntBASIC9.95□□□□□ -0.82
PRKDCP78527 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 TUBB4AP1-201ENST00000450755 1325 ntBASIC9.95□□□□□ -0.82
PRKDCP78527 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC9.95□□□□□ -0.82
PRKDCP78527 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC9.95□□□□□ -0.82
PRKDCP78527 TCAF2P1-201ENST00000291129 2421 ntBASIC9.95□□□□□ -0.82
PRKDCP78527 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
PRKDCP78527 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC9.95□□□□□ -0.82
PRKDCP78527 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC9.95□□□□□ -0.82
PRKDCP78527 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC9.95□□□□□ -0.82
PRKDCP78527 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC9.95□□□□□ -0.82
PRKDCP78527 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC9.95□□□□□ -0.82
PRKDCP78527 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC9.95□□□□□ -0.82
PRKDCP78527 AC079944.2-201ENST00000478867 734 ntBASIC9.95□□□□□ -0.82
PRKDCP78527 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC9.95□□□□□ -0.82
PRKDCP78527 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC9.95□□□□□ -0.82
PRKDCP78527 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC9.95□□□□□ -0.82
PRKDCP78527 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC9.95□□□□□ -0.82
PRKDCP78527 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
PRKDCP78527 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC9.94□□□□□ -0.82
PRKDCP78527 CYP2T1P-202ENST00000641596 2535 ntBASIC9.94□□□□□ -0.82
PRKDCP78527 TPI1P3-201ENST00000335020 740 ntBASIC9.94□□□□□ -0.82
PRKDCP78527 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 GGT8P-201ENST00000418938 532 ntBASIC9.94□□□□□ -0.82
PRKDCP78527 HNRNPA1P3-201ENST00000440968 551 ntBASIC9.94□□□□□ -0.82
PRKDCP78527 AC015818.1-201ENST00000451011 244 ntBASIC9.94□□□□□ -0.82
PRKDCP78527 AC020893.2-201ENST00000506083 723 ntBASIC9.94□□□□□ -0.82
PRKDCP78527 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
PRKDCP78527 NKAPP1-203ENST00000554109 573 ntTSL 4 BASIC9.94□□□□□ -0.82
PRKDCP78527 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC9.94□□□□□ -0.82
PRKDCP78527 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC9.94□□□□□ -0.82
PRKDCP78527 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC9.94□□□□□ -0.82
PRKDCP78527 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC9.94□□□□□ -0.82
PRKDCP78527 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 TFAM-201ENST00000373895 973 ntTSL 2 BASIC9.94□□□□□ -0.82
PRKDCP78527 AL391822.1-201ENST00000452580 562 ntBASIC9.94□□□□□ -0.82
PRKDCP78527 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
PRKDCP78527 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC9.94□□□□□ -0.82
PRKDCP78527 RAB42P1-201ENST00000555078 316 ntBASIC9.94□□□□□ -0.82
PRKDCP78527 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC9.94□□□□□ -0.82
PRKDCP78527 AC103810.4-201ENST00000578601 257 ntBASIC9.94□□□□□ -0.82
PRKDCP78527 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC9.94□□□□□ -0.82
PRKDCP78527 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC9.94□□□□□ -0.82
PRKDCP78527 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC9.94□□□□□ -0.82
PRKDCP78527 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 GSN-206ENST00000394353 2311 ntTSL 2 BASIC9.94□□□□□ -0.82
PRKDCP78527 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
PRKDCP78527 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRKDCP78527 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC9.94□□□□□ -0.82
PRKDCP78527 SSR3-202ENST00000463503 596 ntTSL 4 BASIC9.94□□□□□ -0.82
PRKDCP78527 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC9.94□□□□□ -0.82
PRKDCP78527 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC9.94□□□□□ -0.82
PRKDCP78527 AC136475.7-201ENST00000602949 592 ntBASIC9.94□□□□□ -0.82
PRKDCP78527 AC116036.2-201ENST00000607592 462 ntBASIC9.94□□□□□ -0.82
PRKDCP78527 AC073592.10-201ENST00000624789 597 ntBASIC9.94□□□□□ -0.82
PRKDCP78527 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms