Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CLDN6P56747 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 MIR645-201ENST00000385283 94 ntBASIC13.85□□□□□ -0.19
CLDN6P56747 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.85□□□□□ -0.19
CLDN6P56747 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 AL512306.1-201ENST00000432698 848 ntBASIC13.85□□□□□ -0.19
CLDN6P56747 DDX39AP1-201ENST00000445147 1181 ntBASIC13.85□□□□□ -0.19
CLDN6P56747 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.85□□□□□ -0.19
CLDN6P56747 RPL18AP8-201ENST00000486071 528 ntBASIC13.85□□□□□ -0.19
CLDN6P56747 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN6P56747 AREG-202ENST00000502307 956 ntTSL 5 BASIC13.85□□□□□ -0.19
CLDN6P56747 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.85□□□□□ -0.19
CLDN6P56747 FAM86KP-201ENST00000509817 987 ntBASIC13.85□□□□□ -0.19
CLDN6P56747 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.85□□□□□ -0.19
CLDN6P56747 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.85□□□□□ -0.19
CLDN6P56747 THY1-209ENST00000580275 578 ntTSL 3 BASIC13.85□□□□□ -0.19
CLDN6P56747 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
CLDN6P56747 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.85□□□□□ -0.19
CLDN6P56747 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.85□□□□□ -0.19
CLDN6P56747 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CLDN6P56747 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CLDN6P56747 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.85□□□□□ -0.19
CLDN6P56747 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLDN6P56747 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
CLDN6P56747 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CLDN6P56747 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLDN6P56747 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
CLDN6P56747 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 AC006372.4-201ENST00000624122 1543 ntBASIC13.85□□□□□ -0.19
CLDN6P56747 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLDN6P56747 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN6P56747 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.84□□□□□ -0.19
CLDN6P56747 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CLDN6P56747 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN6P56747 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLDN6P56747 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN6P56747 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CLDN6P56747 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CLDN6P56747 AQP7P5-201ENST00000428759 1049 ntBASIC13.84□□□□□ -0.19
CLDN6P56747 PSMD4P1-201ENST00000433951 1109 ntBASIC13.84□□□□□ -0.19
CLDN6P56747 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN6P56747 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN6P56747 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.84□□□□□ -0.19
CLDN6P56747 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN6P56747 AQP7P4-201ENST00000447083 1042 ntBASIC13.84□□□□□ -0.19
CLDN6P56747 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN6P56747 AQP7P2-201ENST00000453967 1041 ntBASIC13.84□□□□□ -0.19
CLDN6P56747 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.84□□□□□ -0.19
CLDN6P56747 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN6P56747 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN6P56747 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN6P56747 AC095040.1-201ENST00000513286 675 ntBASIC13.84□□□□□ -0.19
CLDN6P56747 TREHP1-201ENST00000531328 465 ntBASIC13.84□□□□□ -0.19
CLDN6P56747 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.84□□□□□ -0.19
CLDN6P56747 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN6P56747 HMGB1P24-201ENST00000611897 328 ntBASIC13.84□□□□□ -0.19
CLDN6P56747 AC148477.9-201ENST00000623974 539 ntBASIC13.84□□□□□ -0.19
CLDN6P56747 AQP7P3-201ENST00000624547 1041 ntBASIC13.84□□□□□ -0.19
CLDN6P56747 AC002044.2-201ENST00000624910 970 ntBASIC13.84□□□□□ -0.19
CLDN6P56747 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN6P56747 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN6P56747 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CLDN6P56747 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLDN6P56747 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.84□□□□□ -0.19
CLDN6P56747 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CLDN6P56747 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLDN6P56747 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLDN6P56747 MROH4P-201ENST00000431302 1578 ntBASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms